EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0028336 (Gene tree)
Gene ID: -
Gene Symbol: Zcchc11
Alias: 6030404K05Rik|9230115F04Rik|Kiaa0191|PPAPD3|Tut4|mKIAA0191
Full Name: zinc finger%2C CCHC domain containing 11
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 102458 bases
Position: chr4:103766221-103868678
Accession: 2445126
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0066489	zf-CCHC	PF00098.23	7.9e-11	1	2
MGP_FVBNJ_P0066489	zf-CCHC	PF00098.23	7.9e-11	2	2
MGP_FVBNJ_P0066491	zf-CCHC	PF00098.23	8e-11	1	2
MGP_FVBNJ_P0066491	zf-CCHC	PF00098.23	8e-11	2	2
MGP_FVBNJ_P0066489	PAP_assoc	PF03828.19	3.4e-28	1	2
MGP_FVBNJ_P0066489	PAP_assoc	PF03828.19	3.4e-28	2	2
MGP_FVBNJ_P0066491	PAP_assoc	PF03828.19	3.8e-28	1	2
MGP_FVBNJ_P0066491	PAP_assoc	PF03828.19	3.8e-28	2	2
MGP_FVBNJ_P0066492	PAP_assoc	PF03828.19	4.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0066489	-	6048	XM_006502978	MGP_FVBNJ_P0066489	1644 (aa)	XP_006503041	B2RX14
MGP_FVBNJ_T0066499	-	587	-	MGP_FVBNJ_P0066499	105 (aa)	-	-
MGP_FVBNJ_T0066498	-	2466	-	-	- (aa)	-	-
MGP_FVBNJ_T0066497	-	484	-	-	- (aa)	-	-
MGP_FVBNJ_T0066496	-	591	-	-	- (aa)	-	-
MGP_FVBNJ_T0066495	-	565	-	-	- (aa)	-	-
MGP_FVBNJ_T0066494	-	541	-	-	- (aa)	-	-
MGP_FVBNJ_T0066493	-	636	-	-	- (aa)	-	-
MGP_FVBNJ_T0066492	-	3283	-	MGP_FVBNJ_P0066492	1006 (aa)	-	-
MGP_FVBNJ_T0066491	-	5861	-	MGP_FVBNJ_P0066491	1648 (aa)	-	-
MGP_FVBNJ_T0066490	-	679	-	MGP_FVBNJ_P0066490	63 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0028336's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0028336's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0028336	Zcchc11	59	58.396	MGP_FVBNJ_G0020455	Zcchc6	63	67.209