EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0028349 (Gene tree)
Gene ID: -
Gene Symbol: Calr4
Alias: 4933403L16Rik|AU017583
Full Name: calreticulin 4
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 35531 bases
Position: chr4:104528755-104564285
Accession: 2140435
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0066568	Calreticulin	PF00262.18	6.4e-76	1	2
MGP_FVBNJ_P0066568	Calreticulin	PF00262.18	6.4e-76	2	2
MGP_FVBNJ_P0066569	Calreticulin	PF00262.18	6.9e-52	1	2
MGP_FVBNJ_P0066569	Calreticulin	PF00262.18	6.9e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0066570	-	1607	-	MGP_FVBNJ_P0066570	420 (aa)	-	-
MGP_FVBNJ_T0066571	-	532	-	-	- (aa)	-	-
MGP_FVBNJ_T0066569	-	1583	-	MGP_FVBNJ_P0066569	313 (aa)	-	-
MGP_FVBNJ_T0066568	-	1320	XM_006502653	MGP_FVBNJ_P0066568	439 (aa)	XP_006502718	A2A8Z3

Gene Model

Click here to download MGP_FVBNJ_G0028349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0028349's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0028349	Calr4	78	36.855	MGP_FVBNJ_G0018074	Canx	68	37.037
MGP_FVBNJ_G0028349	Calr4	86	46.277	MGP_FVBNJ_G0033544	Calr3	86	47.262
MGP_FVBNJ_G0028349	Calr4	77	66.667	MGP_FVBNJ_G0033636	Calr	82	66.181
MGP_FVBNJ_G0028349	Calr4	77	35.000	MGP_FVBNJ_G0033593	Clgn	65	34.500