EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0028397 (Gene tree)
Gene ID: -
Gene Symbol: Rad54l
Alias: RAD54|Rad54
Full Name: RAD54 like (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 30605 bases
Position: chr4:111627551-111658155
Accession: 894697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0066777	ResIII	PF04851.15	2.2e-09	1	1
MGP_FVBNJ_P0066778	ResIII	PF04851.15	2.2e-09	1	1
MGP_FVBNJ_P0066777	DEAD	PF00270.29	9e-07	1	1
MGP_FVBNJ_P0066778	DEAD	PF00270.29	9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0066781	-	1501	-	-	- (aa)	-	-
MGP_FVBNJ_T0066780	-	209	-	-	- (aa)	-	-
MGP_FVBNJ_T0066778	-	3025	-	MGP_FVBNJ_P0066778	747 (aa)	-	-
MGP_FVBNJ_T0066779	-	654	-	-	- (aa)	-	-
MGP_FVBNJ_T0066776	-	4571	-	-	- (aa)	-	-
MGP_FVBNJ_T0066777	-	2780	-	MGP_FVBNJ_P0066777	747 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0028397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0028397's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0028397	Rad54l	88	44.748	MGP_FVBNJ_G0027835	Rad54b	76	44.748
MGP_FVBNJ_G0028397	Rad54l	66	30.112	MGP_FVBNJ_G0030599	Smarcad1	50	30.112
MGP_FVBNJ_G0028397	Rad54l	69	30.361	MGP_FVBNJ_G0027432	Chd1l	54	30.171
MGP_FVBNJ_G0028397	Rad54l	66	33.267	MGP_FVBNJ_G0035434	Smarca1	61	32.031