EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_FVBNJ_G0028517 (Gene tree)
Gene ID
-
Gene Symbol
Pabpc4
Alias
-
Full Name
poly(A) binding protein%2C cytoplasmic 4
Gene Type
protein_coding
Species
Mus_musculus_fvbnj
Status
putative
Strand
Plus strand
Length
39634 bases
Position
chr4:118947346-118986979
Accession
2385206
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_FVBNJ_P0067285PABPPF00658.183.2e-3111
MGP_FVBNJ_P0067281PABPPF00658.183.3e-3111
MGP_FVBNJ_P0067282PABPPF00658.183.5e-3111
MGP_FVBNJ_P0067284PABPPF00658.183.6e-3111
MGP_FVBNJ_P0067285RRM_5PF13893.68.3e-0811
MGP_FVBNJ_P0067281RRM_5PF13893.69.3e-0811
MGP_FVBNJ_P0067282RRM_5PF13893.69.9e-0811
MGP_FVBNJ_P0067284RRM_5PF13893.61.1e-0711
MGP_FVBNJ_P0067285RRM_1PF00076.227.1e-8614
MGP_FVBNJ_P0067285RRM_1PF00076.227.1e-8624
MGP_FVBNJ_P0067285RRM_1PF00076.227.1e-8634
MGP_FVBNJ_P0067285RRM_1PF00076.227.1e-8644
MGP_FVBNJ_P0067281RRM_1PF00076.227.5e-8614
MGP_FVBNJ_P0067281RRM_1PF00076.227.5e-8624
MGP_FVBNJ_P0067281RRM_1PF00076.227.5e-8634
MGP_FVBNJ_P0067281RRM_1PF00076.227.5e-8644
MGP_FVBNJ_P0067282RRM_1PF00076.228.3e-8614
MGP_FVBNJ_P0067282RRM_1PF00076.228.3e-8624
MGP_FVBNJ_P0067282RRM_1PF00076.228.3e-8634
MGP_FVBNJ_P0067282RRM_1PF00076.228.3e-8644
MGP_FVBNJ_P0067284RRM_1PF00076.229.5e-8614
MGP_FVBNJ_P0067284RRM_1PF00076.229.5e-8624
MGP_FVBNJ_P0067284RRM_1PF00076.229.5e-8634
MGP_FVBNJ_P0067284RRM_1PF00076.229.5e-8644
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_FVBNJ_T0067281-3323-MGP_FVBNJ_P0067281657 (aa)--
MGP_FVBNJ_T0067280-245--- (aa)--
MGP_FVBNJ_T0067283-2665-MGP_FVBNJ_P0067283138 (aa)--
MGP_FVBNJ_T0067282-3262-MGP_FVBNJ_P0067282670 (aa)--
MGP_FVBNJ_T0067285-2908-MGP_FVBNJ_P0067285650 (aa)--
MGP_FVBNJ_T0067284-3213-MGP_FVBNJ_P0067284686 (aa)--
MGP_FVBNJ_T0067287-1146--- (aa)--
MGP_FVBNJ_T0067286-692--- (aa)--
Gene Model
Click here to download MGP_FVBNJ_G0028517's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0028517's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_FVBNJ_G0028517Pabpc410094.928MGP_FVBNJ_G0021609Pabpc17993.548
MGP_FVBNJ_G0028517Pabpc49932.576MGP_FVBNJ_G0028225Elavl28934.940
MGP_FVBNJ_G0028517Pabpc49431.061MGP_FVBNJ_G0034229Elavl39233.735
MGP_FVBNJ_G0028517Pabpc410086.232MGP_FVBNJ_G0022945Pabpc69965.120
MGP_FVBNJ_G0028517Pabpc45236.364MGP_FVBNJ_G0025138Celf25837.209
MGP_FVBNJ_G0028517Pabpc45033.803MGP_FVBNJ_G0024008Celf45136.082
MGP_FVBNJ_G0028517Pabpc45035.211MGP_FVBNJ_G0034657Celf66838.144
MGP_FVBNJ_G0028517Pabpc45032.394MGP_FVBNJ_G0027344Celf36934.247
MGP_FVBNJ_G0028517Pabpc410079.710MGP_FVBNJ_G0026632Pabpc1l9958.833
MGP_FVBNJ_G0028517Pabpc410034.167MGP_FVBNJ_G0032858Tial19430.233
MGP_FVBNJ_G0028517Pabpc49932.576MGP_FVBNJ_G0028357Elavl49030.625
MGP_FVBNJ_G0028517Pabpc410039.394MGP_FVBNJ_G0030747Tia19533.333
MGP_FVBNJ_G0028517Pabpc49934.848MGP_FVBNJ_G0033102Elavl19533.553
MGP_FVBNJ_G0028517Pabpc410070.370MGP_FVBNJ_G0026984Pabpc4l9870.552
MGP_FVBNJ_G0028517Pabpc45134.722MGP_FVBNJ_G0035499Rbmx7737.662
MGP_FVBNJ_G0028517Pabpc49037.500MGP_FVBNJ_G0035297Rbm38739.062
MGP_FVBNJ_G0028517Pabpc410068.841MGP_FVBNJ_G0035793Pabpc59564.187
MGP_FVBNJ_G0028517Pabpc48832.258MGP_FVBNJ_G0025935Celf18437.500
MGP_FVBNJ_G0028517Pabpc45036.620MGP_FVBNJ_G0017395Celf55539.785
MGP_FVBNJ_G0028517Pabpc410087.681MGP_FVBNJ_G0024168Pabpc29965.023
MGP_FVBNJ_G0028517Pabpc410081.159MGP_FVBNJ_G0026836-10073.367

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