EuRBPDB

Description

Ensembl ID: MGP_FVBNJ_G0028743 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpr
Alias: 2610003J05Rik|2610528B01Rik|Hnrpr|Hnrpr {ECO:0000313|EMBL:AAH38051.1,GN ECO:0000313|MGI:MGI:1891692}|hnRNPR
Full Name: heterogeneous nuclear ribonucleoprotein R
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 48010 bases
Position: chr4:132303786-132351795
Accession: 1891692
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0068314	RRM_1	PF00076.22	2e-43	1	3
MGP_FVBNJ_P0068314	RRM_1	PF00076.22	2e-43	2	3
MGP_FVBNJ_P0068314	RRM_1	PF00076.22	2e-43	3	3
MGP_FVBNJ_P0068317	RRM_1	PF00076.22	5.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0068321	-	1912	-	-	- (aa)	-	-
MGP_FVBNJ_T0068320	-	3330	-	-	- (aa)	-	-
MGP_FVBNJ_T0068318	-	292	-	MGP_FVBNJ_P0068318	73 (aa)	-	-
MGP_FVBNJ_T0068319	-	474	-	-	- (aa)	-	-
MGP_FVBNJ_T0068316	-	576	-	MGP_FVBNJ_P0068316	72 (aa)	-	-
MGP_FVBNJ_T0068317	-	980	-	MGP_FVBNJ_P0068317	270 (aa)	-	-
MGP_FVBNJ_T0068314	-	20818	XM_006539221	MGP_FVBNJ_P0068314	558 (aa)	XP_006539284	A2AW40
MGP_FVBNJ_T0068315	-	859	-	MGP_FVBNJ_P0068315	103 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0028743	Hnrnpr	72	48.642	MGP_FVBNJ_G0029362	Rbm47	88	59.859
MGP_FVBNJ_G0028743	Hnrnpr	99	81.716	MGP_FVBNJ_G0034864	Syncrip	94	80.263
MGP_FVBNJ_G0028743	Hnrnpr	57	37.908	MGP_FVBNJ_G0024090	Dnd1	62	33.040
MGP_FVBNJ_G0028743	Hnrnpr	54	57.823	MGP_FVBNJ_G0024841	A1cf	52	53.896
MGP_FVBNJ_G0028743	Hnrnpr	59	56.329	MGP_FVBNJ_G0027125	Rbm46	65	56.774