EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0028827 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb17
Alias: AA589413|Lp-1|Miz1|Zfp100|Znf151|mZ13
Full Name: zinc finger and BTB domain containing 17
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 23865 bases
Position: chr4:137732865-137756729
Accession: 107410
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0068650	zf-C2H2	PF00096.26	2.8e-60	1	10
MGP_FVBNJ_P0068650	zf-C2H2	PF00096.26	2.8e-60	2	10
MGP_FVBNJ_P0068650	zf-C2H2	PF00096.26	2.8e-60	3	10
MGP_FVBNJ_P0068650	zf-C2H2	PF00096.26	2.8e-60	4	10
MGP_FVBNJ_P0068650	zf-C2H2	PF00096.26	2.8e-60	5	10
MGP_FVBNJ_P0068650	zf-C2H2	PF00096.26	2.8e-60	6	10
MGP_FVBNJ_P0068650	zf-C2H2	PF00096.26	2.8e-60	7	10
MGP_FVBNJ_P0068650	zf-C2H2	PF00096.26	2.8e-60	8	10
MGP_FVBNJ_P0068650	zf-C2H2	PF00096.26	2.8e-60	9	10
MGP_FVBNJ_P0068650	zf-C2H2	PF00096.26	2.8e-60	10	10
MGP_FVBNJ_P0068650	zf-met	PF12874.7	2.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0068653	-	337	-	-	- (aa)	-	-
MGP_FVBNJ_T0068652	-	2973	-	-	- (aa)	-	-
MGP_FVBNJ_T0068651	-	3478	-	-	- (aa)	-	-
MGP_FVBNJ_T0068650	-	2722	XM_006538727	MGP_FVBNJ_P0068650	794 (aa)	XP_006538790	Q60821
MGP_FVBNJ_T0068656	-	867	-	-	- (aa)	-	-
MGP_FVBNJ_T0068655	-	771	-	-	- (aa)	-	-
MGP_FVBNJ_T0068654	-	785	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0028827's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0028827's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0028827	Zbtb17	55	41.129	MGP_FVBNJ_G0032811	E430018J23Rik	73	42.308
MGP_FVBNJ_G0028827	Zbtb17	56	39.781	MGP_FVBNJ_G0020090	Zkscan4	53	46.825
MGP_FVBNJ_G0028827	Zbtb17	58	42.857	MGP_FVBNJ_G0031902	Zfp715	89	43.636
MGP_FVBNJ_G0028827	Zbtb17	55	44.224	MGP_FVBNJ_G0031900	Zfp141	62	44.224
MGP_FVBNJ_G0028827	Zbtb17	79	32.955	MGP_FVBNJ_G0020786	Zfp131	73	31.183
MGP_FVBNJ_G0028827	Zbtb17	55	43.322	MGP_FVBNJ_G0018082	Zfp454	65	42.424
MGP_FVBNJ_G0028827	Zbtb17	69	44.706	MGP_FVBNJ_G0031768	Zfp420	97	44.706
MGP_FVBNJ_G0028827	Zbtb17	63	38.614	MGP_FVBNJ_G0030470	Repin1	93	38.614
MGP_FVBNJ_G0028827	Zbtb17	64	42.899	MGP_FVBNJ_G0023028	Zfp677	83	42.899
MGP_FVBNJ_G0028827	Zbtb17	74	44.444	MGP_FVBNJ_G0018411	Bcl6b	68	45.312
MGP_FVBNJ_G0028827	Zbtb17	78	39.568	MGP_FVBNJ_G0026407	Gzf1	83	37.118
MGP_FVBNJ_G0028827	Zbtb17	56	35.083	MGP_FVBNJ_G0026691	Zfp334	65	39.216
MGP_FVBNJ_G0028827	Zbtb17	62	42.949	MGP_FVBNJ_G0031593	Zfp235	71	44.248
MGP_FVBNJ_G0028827	Zbtb17	61	43.939	MGP_FVBNJ_G0031592	Zfp112	61	43.939
MGP_FVBNJ_G0028827	Zbtb17	59	46.746	MGP_FVBNJ_G0031595	Zfp111	72	46.746
MGP_FVBNJ_G0028827	Zbtb17	62	34.819	MGP_FVBNJ_G0033745	Zfp319	91	37.805
MGP_FVBNJ_G0028827	Zbtb17	58	42.857	MGP_FVBNJ_G0032808	Zfp768	52	42.231
MGP_FVBNJ_G0028827	Zbtb17	59	32.021	MGP_FVBNJ_G0031630	Zfp574	71	38.532
MGP_FVBNJ_G0028827	Zbtb17	63	42.444	MGP_FVBNJ_G0023030	Zfp51	84	42.444
MGP_FVBNJ_G0028827	Zbtb17	79	46.354	MGP_FVBNJ_G0026916	Mynn	85	46.354
MGP_FVBNJ_G0028827	Zbtb17	62	50.909	MGP_FVBNJ_G0029280	Zbtb49	62	67.742
MGP_FVBNJ_G0028827	Zbtb17	58	41.141	MGP_FVBNJ_G0020511	Zfp759	86	41.141
MGP_FVBNJ_G0028827	Zbtb17	56	40.741	MGP_FVBNJ_G0031348	Zfp865	78	35.743
MGP_FVBNJ_G0028827	Zbtb17	58	42.727	MGP_FVBNJ_G0024402	Zfp236	69	42.727
MGP_FVBNJ_G0028827	Zbtb17	56	41.606	MGP_FVBNJ_G0020510	Rslcan18	66	41.600
MGP_FVBNJ_G0028827	Zbtb17	54	46.512	MGP_FVBNJ_G0033900	Zfp1	67	42.083
MGP_FVBNJ_G0028827	Zbtb17	77	34.615	MGP_FVBNJ_G0023058	Zscan10	78	43.165
MGP_FVBNJ_G0028827	Zbtb17	71	39.891	MGP_FVBNJ_G0023051	Zfp945	93	39.233
MGP_FVBNJ_G0028827	Zbtb17	55	41.083	MGP_FVBNJ_G0018226	Zfp867	81	41.083
MGP_FVBNJ_G0028827	Zbtb17	58	40.968	MGP_FVBNJ_G0033529	Zfp882	85	42.985
MGP_FVBNJ_G0028827	Zbtb17	56	44.086	MGP_FVBNJ_G0031600	Zfp94	76	44.086
MGP_FVBNJ_G0028827	Zbtb17	61	40.576	MGP_FVBNJ_G0034174	Zfp26	79	43.413
MGP_FVBNJ_G0028827	Zbtb17	58	47.260	MGP_FVBNJ_G0031891	-	67	47.260
MGP_FVBNJ_G0028827	Zbtb17	59	36.986	MGP_FVBNJ_G0018176	Zfp672	90	40.000