EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0029280 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb49
Alias: 4930518A03Rik|Zfp509|Znf509
Full Name: zinc finger and BTB domain containing 49
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 30723 bases
Position: chr5:34978469-35009191
Accession: 1922329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0071063	zf-C2H2	PF00096.26	1.7e-35	1	7
MGP_FVBNJ_P0071063	zf-C2H2	PF00096.26	1.7e-35	2	7
MGP_FVBNJ_P0071063	zf-C2H2	PF00096.26	1.7e-35	3	7
MGP_FVBNJ_P0071063	zf-C2H2	PF00096.26	1.7e-35	4	7
MGP_FVBNJ_P0071063	zf-C2H2	PF00096.26	1.7e-35	5	7
MGP_FVBNJ_P0071063	zf-C2H2	PF00096.26	1.7e-35	6	7
MGP_FVBNJ_P0071063	zf-C2H2	PF00096.26	1.7e-35	7	7
MGP_FVBNJ_P0071068	zf-C2H2	PF00096.26	1.7e-09	1	2
MGP_FVBNJ_P0071068	zf-C2H2	PF00096.26	1.7e-09	2	2
MGP_FVBNJ_P0071071	zf-C2H2	PF00096.26	8e-06	1	1
MGP_FVBNJ_P0071063	zf-met	PF12874.7	3.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0071071	-	2645	-	MGP_FVBNJ_P0071071	480 (aa)	-	-
MGP_FVBNJ_T0071070	-	420	-	MGP_FVBNJ_P0071070	51 (aa)	-	-
MGP_FVBNJ_T0071062	-	2868	-	-	- (aa)	-	-
MGP_FVBNJ_T0071063	-	2978	-	MGP_FVBNJ_P0071063	756 (aa)	-	-
MGP_FVBNJ_T0071072	-	1337	-	-	- (aa)	-	-
MGP_FVBNJ_T0071066	-	2271	-	MGP_FVBNJ_P0071066	444 (aa)	-	-
MGP_FVBNJ_T0071067	-	2028	-	MGP_FVBNJ_P0071067	65 (aa)	-	-
MGP_FVBNJ_T0071064	-	2721	-	MGP_FVBNJ_P0071064	428 (aa)	-	-
MGP_FVBNJ_T0071065	-	1654	-	MGP_FVBNJ_P0071065	110 (aa)	-	-
MGP_FVBNJ_T0071068	-	463	-	MGP_FVBNJ_P0071068	120 (aa)	-	-
MGP_FVBNJ_T0071069	-	688	-	MGP_FVBNJ_P0071069	95 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0029280's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0029280's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0029280	Zbtb49	95	48.611	MGP_FVBNJ_G0021824	Zfp251	69	49.741
MGP_FVBNJ_G0029280	Zbtb49	62	47.887	MGP_FVBNJ_G0016399	Zbtb41	71	41.279
MGP_FVBNJ_G0029280	Zbtb49	78	48.611	MGP_FVBNJ_G0023030	Zfp51	83	45.361
MGP_FVBNJ_G0029280	Zbtb49	60	45.588	MGP_FVBNJ_G0023036	Gm10226	100	47.561
MGP_FVBNJ_G0029280	Zbtb49	62	51.786	MGP_FVBNJ_G0029613	Gfi1	100	49.219
MGP_FVBNJ_G0029280	Zbtb49	78	44.872	MGP_FVBNJ_G0018226	Zfp867	83	48.187
MGP_FVBNJ_G0029280	Zbtb49	85	45.714	MGP_FVBNJ_G0033529	Zfp882	85	46.114
MGP_FVBNJ_G0029280	Zbtb49	69	47.887	MGP_FVBNJ_G0034174	Zfp26	80	47.668
MGP_FVBNJ_G0029280	Zbtb49	78	47.143	MGP_FVBNJ_G0018176	Zfp672	96	48.214
MGP_FVBNJ_G0029280	Zbtb49	63	55.882	MGP_FVBNJ_G0031340	Zfp628	53	41.949
MGP_FVBNJ_G0029280	Zbtb49	62	47.887	MGP_FVBNJ_G0024402	Zfp236	62	43.023
MGP_FVBNJ_G0029280	Zbtb49	62	43.836	MGP_FVBNJ_G0035206	Zfp651	71	43.519
MGP_FVBNJ_G0029280	Zbtb49	76	48.611	MGP_FVBNJ_G0033900	Zfp1	63	49.485
MGP_FVBNJ_G0029280	Zbtb49	62	50.704	MGP_FVBNJ_G0023058	Zscan10	89	47.953
MGP_FVBNJ_G0029280	Zbtb49	77	45.833	MGP_FVBNJ_G0023051	Zfp945	77	43.814
MGP_FVBNJ_G0029280	Zbtb49	78	45.833	MGP_FVBNJ_G0030950	Zfp637	78	46.061
MGP_FVBNJ_G0029280	Zbtb49	62	67.742	MGP_FVBNJ_G0028827	Zbtb17	62	50.909
MGP_FVBNJ_G0029280	Zbtb49	62	45.205	MGP_FVBNJ_G0018810	Zfp652	57	42.593
MGP_FVBNJ_G0029280	Zbtb49	68	46.032	MGP_FVBNJ_G0026260	Zfp661	60	44.845
MGP_FVBNJ_G0029280	Zbtb49	63	50.000	MGP_FVBNJ_G0018082	Zfp454	65	47.423
MGP_FVBNJ_G0029280	Zbtb49	76	50.000	MGP_FVBNJ_G0032808	Zfp768	51	48.810
MGP_FVBNJ_G0029280	Zbtb49	82	50.000	MGP_FVBNJ_G0031600	Zfp94	76	48.454
MGP_FVBNJ_G0029280	Zbtb49	60	45.714	MGP_FVBNJ_G0018411	Bcl6b	54	47.368
MGP_FVBNJ_G0029280	Zbtb49	61	50.704	MGP_FVBNJ_G0031593	Zfp235	63	50.000
MGP_FVBNJ_G0029280	Zbtb49	74	53.125	MGP_FVBNJ_G0031595	Zfp111	70	48.454
MGP_FVBNJ_G0029280	Zbtb49	61	50.704	MGP_FVBNJ_G0031594	Zfp114	53	49.727
MGP_FVBNJ_G0029280	Zbtb49	59	49.296	MGP_FVBNJ_G0031597	Zfp108	66	47.143
MGP_FVBNJ_G0029280	Zbtb49	74	47.297	MGP_FVBNJ_G0031599	Zfp61	50	47.938
MGP_FVBNJ_G0029280	Zbtb49	62	51.389	MGP_FVBNJ_G0031891	-	70	49.223
MGP_FVBNJ_G0029280	Zbtb49	64	47.945	MGP_FVBNJ_G0032811	E430018J23Rik	62	45.000
MGP_FVBNJ_G0029280	Zbtb49	66	45.455	MGP_FVBNJ_G0032810	Zfp747	68	41.844
MGP_FVBNJ_G0029280	Zbtb49	73	49.275	MGP_FVBNJ_G0031902	Zfp715	62	45.026
MGP_FVBNJ_G0029280	Zbtb49	89	50.000	MGP_FVBNJ_G0031768	Zfp420	98	48.744
MGP_FVBNJ_G0029280	Zbtb49	60	47.222	MGP_FVBNJ_G0030470	Repin1	95	38.889
MGP_FVBNJ_G0029280	Zbtb49	78	46.479	MGP_FVBNJ_G0023028	Zfp677	79	46.500
MGP_FVBNJ_G0029280	Zbtb49	62	46.479	MGP_FVBNJ_G0026407	Gzf1	66	44.103
MGP_FVBNJ_G0029280	Zbtb49	66	46.479	MGP_FVBNJ_G0020090	Zkscan4	53	46.774
MGP_FVBNJ_G0029280	Zbtb49	94	45.833	MGP_FVBNJ_G0026691	Zfp334	71	47.436
MGP_FVBNJ_G0029280	Zbtb49	75	45.833	MGP_FVBNJ_G0020511	Zfp759	90	45.503
MGP_FVBNJ_G0029280	Zbtb49	64	48.052	MGP_FVBNJ_G0020510	Rslcan18	64	48.503
MGP_FVBNJ_G0029280	Zbtb49	90	50.704	MGP_FVBNJ_G0026916	Mynn	85	45.128
MGP_FVBNJ_G0029280	Zbtb49	96	45.070	MGP_FVBNJ_G0030604	Prdm5	79	40.244
MGP_FVBNJ_G0029280	Zbtb49	74	50.000	MGP_FVBNJ_G0031630	Zfp574	60	43.651