EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_FVBNJ_G0029362 (Gene tree)
Gene ID
-
Gene Symbol
Rbm47
Alias
9530077J19Rik
Full Name
RNA binding motif protein 47
Gene Type
protein_coding
Species
Mus_musculus_fvbnj
Status
putative
Strand
Minus strand
Length
157492 bases
Position
chr5:62463541-62621032
Accession
2384294
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_FVBNJ_P0071537RRM_1PF00076.223.6e-3713
MGP_FVBNJ_P0071537RRM_1PF00076.223.6e-3723
MGP_FVBNJ_P0071537RRM_1PF00076.223.6e-3733
MGP_FVBNJ_P0071533RRM_1PF00076.225.7e-3713
MGP_FVBNJ_P0071533RRM_1PF00076.225.7e-3723
MGP_FVBNJ_P0071533RRM_1PF00076.225.7e-3733
MGP_FVBNJ_P0071534RRM_1PF00076.225.7e-3713
MGP_FVBNJ_P0071534RRM_1PF00076.225.7e-3723
MGP_FVBNJ_P0071534RRM_1PF00076.225.7e-3733
MGP_FVBNJ_P0071535RRM_1PF00076.225.7e-3713
MGP_FVBNJ_P0071535RRM_1PF00076.225.7e-3723
MGP_FVBNJ_P0071535RRM_1PF00076.225.7e-3733
MGP_FVBNJ_P0071536RRM_1PF00076.225.7e-3713
MGP_FVBNJ_P0071536RRM_1PF00076.225.7e-3723
MGP_FVBNJ_P0071536RRM_1PF00076.225.7e-3733
MGP_FVBNJ_P0071538RRM_1PF00076.225.7e-3713
MGP_FVBNJ_P0071538RRM_1PF00076.225.7e-3723
MGP_FVBNJ_P0071538RRM_1PF00076.225.7e-3733
MGP_FVBNJ_P0071539RRM_1PF00076.225.7e-3713
MGP_FVBNJ_P0071539RRM_1PF00076.225.7e-3723
MGP_FVBNJ_P0071539RRM_1PF00076.225.7e-3733
MGP_FVBNJ_P0071541RRM_1PF00076.222.9e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_FVBNJ_T0071541-703-MGP_FVBNJ_P0071541158 (aa)--
MGP_FVBNJ_T0071540-2376--- (aa)--
MGP_FVBNJ_T0071543-332-MGP_FVBNJ_P007154313 (aa)--
MGP_FVBNJ_T0071542-504--- (aa)--
MGP_FVBNJ_T0071545-453--- (aa)--
MGP_FVBNJ_T0071544-529-MGP_FVBNJ_P00715446 (aa)--
MGP_FVBNJ_T0071546-465--- (aa)--
MGP_FVBNJ_T0071533-4632XM_006503956MGP_FVBNJ_P0071533590 (aa)XP_006504019Q91WT8
MGP_FVBNJ_T0071534-5141-MGP_FVBNJ_P0071534590 (aa)--
MGP_FVBNJ_T0071535-4572-MGP_FVBNJ_P0071535590 (aa)--
MGP_FVBNJ_T0071536-4825-MGP_FVBNJ_P0071536590 (aa)--
MGP_FVBNJ_T0071537-2951-MGP_FVBNJ_P0071537521 (aa)--
MGP_FVBNJ_T0071538-3158-MGP_FVBNJ_P0071538590 (aa)--
MGP_FVBNJ_T0071539-2176-MGP_FVBNJ_P0071539590 (aa)--
Gene Model
Click here to download MGP_FVBNJ_G0029362's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0029362's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_FVBNJ_G0029362Rbm478967.376MGP_FVBNJ_G0024841A1cf7557.816
MGP_FVBNJ_G0029362Rbm478859.859MGP_FVBNJ_G0028743Hnrnpr7248.642
MGP_FVBNJ_G0029362Rbm478150.781MGP_FVBNJ_G0024090Dnd15841.748
MGP_FVBNJ_G0029362Rbm479473.649MGP_FVBNJ_G0027125Rbm466672.468
MGP_FVBNJ_G0029362Rbm478858.451MGP_FVBNJ_G0034864Syncrip7557.522

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