EuRBPDB

Description

Ensembl ID: MGP_FVBNJ_G0029554 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpdl
Alias: AA407431|AA959857|D5Ertd650e|D5Wsu145e|Hnrnpdl1|Hnrpdl|HnrpdlGN|JKTBP|hnRNP DL|hnRNP-DL
Full Name: heterogeneous nuclear ribonucleoprotein D-like
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 6111 bases
Position: chr5:96715085-96721195
Accession: 1355299
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0072438	RRM_1	PF00076.22	2.3e-33	1	2
MGP_FVBNJ_P0072438	RRM_1	PF00076.22	2.3e-33	2	2
MGP_FVBNJ_P0072437	RRM_1	PF00076.22	5.3e-33	1	2
MGP_FVBNJ_P0072437	RRM_1	PF00076.22	5.3e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0072436	-	1842	-	-	- (aa)	-	-
MGP_FVBNJ_T0072437	-	2752	-	MGP_FVBNJ_P0072437	420 (aa)	-	-
MGP_FVBNJ_T0072438	-	2374	-	MGP_FVBNJ_P0072438	322 (aa)	-	-
MGP_FVBNJ_T0072441	-	1506	-	MGP_FVBNJ_P0072441	110 (aa)	-	-
MGP_FVBNJ_T0072439	-	2149	-	MGP_FVBNJ_P0072439	420 (aa)	-	-
MGP_FVBNJ_T0072440	-	884	-	-	- (aa)	-	-
MGP_FVBNJ_T0072442	-	846	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0029554	Hnrnpdl	78	41.634	MGP_FVBNJ_G0018747	Msi2	100	54.867
MGP_FVBNJ_G0029554	Hnrnpdl	58	38.542	MGP_FVBNJ_G0030504	Hnrnpa2b1	58	38.824
MGP_FVBNJ_G0029554	Hnrnpdl	89	65.278	MGP_FVBNJ_G0029552	Hnrnpd	100	80.000
MGP_FVBNJ_G0029554	Hnrnpdl	75	39.676	MGP_FVBNJ_G0029738	Msi1	58	48.052
MGP_FVBNJ_G0029554	Hnrnpdl	51	34.706	MGP_FVBNJ_G0020438	Hnrnpa0	64	34.706
MGP_FVBNJ_G0029554	Hnrnpdl	69	36.036	MGP_FVBNJ_G0017327	Dazap1	99	39.881
MGP_FVBNJ_G0029554	Hnrnpdl	54	36.709	MGP_FVBNJ_G0017321	Cirbp	73	36.709
MGP_FVBNJ_G0029554	Hnrnpdl	89	57.292	MGP_FVBNJ_G0018097	Hnrnpab	82	58.419
MGP_FVBNJ_G0029554	Hnrnpdl	55	40.000	MGP_FVBNJ_G0025662	Hnrnpa3	79	33.882
MGP_FVBNJ_G0029554	Hnrnpdl	64	30.000	MGP_FVBNJ_G0028906	Tardbp	77	31.447