EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0029613 (Gene tree)
Gene ID: -
Gene Symbol: Gfi1
Alias: AW495828|Gfi-1|Pal-1|Pal1
Full Name: growth factor independent 1
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 9332 bases
Position: chr5:104417529-104426860
Accession: 103170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0072719	zf-C2H2	PF00096.26	5e-28	1	6
MGP_FVBNJ_P0072719	zf-C2H2	PF00096.26	5e-28	2	6
MGP_FVBNJ_P0072719	zf-C2H2	PF00096.26	5e-28	3	6
MGP_FVBNJ_P0072719	zf-C2H2	PF00096.26	5e-28	4	6
MGP_FVBNJ_P0072719	zf-C2H2	PF00096.26	5e-28	5	6
MGP_FVBNJ_P0072719	zf-C2H2	PF00096.26	5e-28	6	6
MGP_FVBNJ_P0072720	zf-C2H2	PF00096.26	5e-28	1	6
MGP_FVBNJ_P0072720	zf-C2H2	PF00096.26	5e-28	2	6
MGP_FVBNJ_P0072720	zf-C2H2	PF00096.26	5e-28	3	6
MGP_FVBNJ_P0072720	zf-C2H2	PF00096.26	5e-28	4	6
MGP_FVBNJ_P0072720	zf-C2H2	PF00096.26	5e-28	5	6
MGP_FVBNJ_P0072720	zf-C2H2	PF00096.26	5e-28	6	6
MGP_FVBNJ_P0072721	zf-C2H2	PF00096.26	1.5e-27	1	6
MGP_FVBNJ_P0072721	zf-C2H2	PF00096.26	1.5e-27	2	6
MGP_FVBNJ_P0072721	zf-C2H2	PF00096.26	1.5e-27	3	6
MGP_FVBNJ_P0072721	zf-C2H2	PF00096.26	1.5e-27	4	6
MGP_FVBNJ_P0072721	zf-C2H2	PF00096.26	1.5e-27	5	6
MGP_FVBNJ_P0072721	zf-C2H2	PF00096.26	1.5e-27	6	6
MGP_FVBNJ_P0072722	zf-C2H2	PF00096.26	9.4e-25	1	4
MGP_FVBNJ_P0072722	zf-C2H2	PF00096.26	9.4e-25	2	4
MGP_FVBNJ_P0072722	zf-C2H2	PF00096.26	9.4e-25	3	4
MGP_FVBNJ_P0072722	zf-C2H2	PF00096.26	9.4e-25	4	4
MGP_FVBNJ_P0072722	zf-met	PF12874.7	2.2e-08	1	1
MGP_FVBNJ_P0072719	zf-met	PF12874.7	2.5e-07	1	1
MGP_FVBNJ_P0072720	zf-met	PF12874.7	2.5e-07	1	1
MGP_FVBNJ_P0072721	zf-met	PF12874.7	4.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0072719	-	2648	XM_006534791	MGP_FVBNJ_P0072719	423 (aa)	XP_006534854	A0A0R4J292
MGP_FVBNJ_T0072720	-	2860	-	MGP_FVBNJ_P0072720	423 (aa)	-	-
MGP_FVBNJ_T0072721	-	2639	-	MGP_FVBNJ_P0072721	489 (aa)	-	-
MGP_FVBNJ_T0072722	-	1482	-	MGP_FVBNJ_P0072722	135 (aa)	-	-
MGP_FVBNJ_T0072723	-	689	-	MGP_FVBNJ_P0072723	186 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0029613's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0029613's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0029613	Gfi1	100	43.590	MGP_FVBNJ_G0030950	Zfp637	71	43.590
MGP_FVBNJ_G0029613	Gfi1	100	46.457	MGP_FVBNJ_G0031600	Zfp94	65	44.970
MGP_FVBNJ_G0029613	Gfi1	100	49.254	MGP_FVBNJ_G0021824	Zfp251	74	47.024
MGP_FVBNJ_G0029613	Gfi1	99	45.133	MGP_FVBNJ_G0030604	Prdm5	74	43.846
MGP_FVBNJ_G0029613	Gfi1	100	50.427	MGP_FVBNJ_G0031597	Zfp108	65	45.000
MGP_FVBNJ_G0029613	Gfi1	100	48.031	MGP_FVBNJ_G0031593	Zfp235	62	46.377
MGP_FVBNJ_G0029613	Gfi1	100	47.368	MGP_FVBNJ_G0026729	Zfp64	70	38.298
MGP_FVBNJ_G0029613	Gfi1	100	44.882	MGP_FVBNJ_G0031902	Zfp715	63	43.210
MGP_FVBNJ_G0029613	Gfi1	99	47.368	MGP_FVBNJ_G0031348	Zfp865	66	46.753
MGP_FVBNJ_G0029613	Gfi1	100	46.094	MGP_FVBNJ_G0033529	Zfp882	85	46.094
MGP_FVBNJ_G0029613	Gfi1	100	50.467	MGP_FVBNJ_G0031891	-	70	48.276
MGP_FVBNJ_G0029613	Gfi1	99	48.031	MGP_FVBNJ_G0020090	Zkscan4	51	48.031
MGP_FVBNJ_G0029613	Gfi1	100	45.794	MGP_FVBNJ_G0018082	Zfp454	68	42.262
MGP_FVBNJ_G0029613	Gfi1	100	45.312	MGP_FVBNJ_G0023028	Zfp677	79	43.452
MGP_FVBNJ_G0029613	Gfi1	99	45.714	MGP_FVBNJ_G0031630	Zfp574	62	43.925
MGP_FVBNJ_G0029613	Gfi1	100	46.457	MGP_FVBNJ_G0033900	Zfp1	60	43.478
MGP_FVBNJ_G0029613	Gfi1	100	42.857	MGP_FVBNJ_G0023058	Zscan10	77	42.771
MGP_FVBNJ_G0029613	Gfi1	100	49.219	MGP_FVBNJ_G0029280	Zbtb49	62	51.786
MGP_FVBNJ_G0029613	Gfi1	100	54.321	MGP_FVBNJ_G0032808	Zfp768	51	45.833
MGP_FVBNJ_G0029613	Gfi1	100	46.269	MGP_FVBNJ_G0023030	Zfp51	77	44.828
MGP_FVBNJ_G0029613	Gfi1	100	48.276	MGP_FVBNJ_G0018176	Zfp672	90	48.276
MGP_FVBNJ_G0029613	Gfi1	99	44.444	MGP_FVBNJ_G0031351	Zfp784	71	44.444
MGP_FVBNJ_G0029613	Gfi1	99	47.287	MGP_FVBNJ_G0030470	Repin1	90	47.287
MGP_FVBNJ_G0029613	Gfi1	100	48.507	MGP_FVBNJ_G0031768	Zfp420	97	49.194
MGP_FVBNJ_G0029613	Gfi1	99	45.038	MGP_FVBNJ_G0032811	E430018J23Rik	73	42.197
MGP_FVBNJ_G0029613	Gfi1	99	47.222	MGP_FVBNJ_G0032810	Zfp747	50	45.536
MGP_FVBNJ_G0029613	Gfi1	100	46.739	MGP_FVBNJ_G0024402	Zfp236	54	46.739
MGP_FVBNJ_G0029613	Gfi1	99	48.507	MGP_FVBNJ_G0026260	Zfp661	62	48.507
MGP_FVBNJ_G0029613	Gfi1	100	50.000	MGP_FVBNJ_G0031595	Zfp111	73	46.591
MGP_FVBNJ_G0029613	Gfi1	100	51.261	MGP_FVBNJ_G0031594	Zfp114	54	50.331
MGP_FVBNJ_G0029613	Gfi1	100	39.535	MGP_FVBNJ_G0033745	Zfp319	93	40.116
MGP_FVBNJ_G0029613	Gfi1	100	50.746	MGP_FVBNJ_G0034174	Zfp26	77	47.159
MGP_FVBNJ_G0029613	Gfi1	100	47.863	MGP_FVBNJ_G0026691	Zfp334	62	47.651
MGP_FVBNJ_G0029613	Gfi1	100	46.018	MGP_FVBNJ_G0020511	Zfp759	88	46.018
MGP_FVBNJ_G0029613	Gfi1	100	47.788	MGP_FVBNJ_G0020510	Rslcan18	71	47.788
MGP_FVBNJ_G0029613	Gfi1	100	45.238	MGP_FVBNJ_G0018226	Zfp867	79	43.023