EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0029769 (Gene tree)
Gene ID: -
Gene Symbol: Rbm19
Alias: 1200009A02Rik|AV302714|NPO
Full Name: RNA binding motif protein 19
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 83776 bases
Position: chr5:117349431-117433206
Accession: 1921361
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0073508	RRM_1	PF00076.22	1.1e-85	1	5
MGP_FVBNJ_P0073508	RRM_1	PF00076.22	1.1e-85	2	5
MGP_FVBNJ_P0073508	RRM_1	PF00076.22	1.1e-85	3	5
MGP_FVBNJ_P0073508	RRM_1	PF00076.22	1.1e-85	4	5
MGP_FVBNJ_P0073508	RRM_1	PF00076.22	1.1e-85	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0073514	-	485	-	-	- (aa)	-	-
MGP_FVBNJ_T0073515	-	1933	-	-	- (aa)	-	-
MGP_FVBNJ_T0073516	-	391	-	-	- (aa)	-	-
MGP_FVBNJ_T0073517	-	360	-	-	- (aa)	-	-
MGP_FVBNJ_T0073510	-	3900	-	MGP_FVBNJ_P0073510	870 (aa)	-	-
MGP_FVBNJ_T0073511	-	600	-	-	- (aa)	-	-
MGP_FVBNJ_T0073512	-	1396	-	-	- (aa)	-	-
MGP_FVBNJ_T0073513	-	635	-	-	- (aa)	-	-
MGP_FVBNJ_T0073509	-	455	-	-	- (aa)	-	-
MGP_FVBNJ_T0073508	-	4010	-	MGP_FVBNJ_P0073508	952 (aa)	-	Q8R3C6

Gene Model

Click here to download MGP_FVBNJ_G0029769's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0029769's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0029769	Rbm19	70	34.667	MGP_FVBNJ_G0022945	Pabpc6	57	34.667
MGP_FVBNJ_G0029769	Rbm19	72	36.066	MGP_FVBNJ_G0026632	Pabpc1l	60	35.484
MGP_FVBNJ_G0029769	Rbm19	70	34.667	MGP_FVBNJ_G0024168	Pabpc2	59	34.667
MGP_FVBNJ_G0029769	Rbm19	54	30.256	MGP_FVBNJ_G0021609	Pabpc1	55	40.000