EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0029869 (Gene tree)
Gene ID: -
Gene Symbol: Ddx55
Alias: 2810021H22Rik|Kiaa1595|mKIAA1595
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 15779 bases
Position: chr5:122096019-122111797
Accession: 1915098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0074104	ResIII	PF04851.15	5.6e-07	1	1
MGP_FVBNJ_P0074104	DEAD	PF00270.29	1.1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0074108	-	824	-	-	- (aa)	-	-
MGP_FVBNJ_T0074103	-	3516	-	MGP_FVBNJ_P0074103	135 (aa)	-	Q6ZPL9
MGP_FVBNJ_T0074106	-	477	-	-	- (aa)	-	-
MGP_FVBNJ_T0074107	-	1430	-	-	- (aa)	-	-
MGP_FVBNJ_T0074104	-	2790	-	MGP_FVBNJ_P0074104	618 (aa)	-	-
MGP_FVBNJ_T0074105	-	445	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0029869's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0029869's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0029869	Ddx55	57	35.733	MGP_FVBNJ_G0016758	D1Pas1	54	35.733
MGP_FVBNJ_G0029869	Ddx55	57	35.977	MGP_FVBNJ_G0031183	Ddx47	81	35.977
MGP_FVBNJ_G0029869	Ddx55	57	35.635	MGP_FVBNJ_G0020413	Ddx41	55	35.440
MGP_FVBNJ_G0029869	Ddx55	72	31.528	MGP_FVBNJ_G0025340	Ddx31	74	31.528
MGP_FVBNJ_G0029869	Ddx55	57	30.137	MGP_FVBNJ_G0019136	Ddx5	68	30.137
MGP_FVBNJ_G0029869	Ddx55	57	32.687	MGP_FVBNJ_G0021887	Ddx17	53	32.687
MGP_FVBNJ_G0029869	Ddx55	57	30.362	MGP_FVBNJ_G0022488	Eif4a2	93	30.362
MGP_FVBNJ_G0029869	Ddx55	73	38.631	MGP_FVBNJ_G0034562	Ddx10	50	38.631
MGP_FVBNJ_G0029869	Ddx55	58	32.044	MGP_FVBNJ_G0034823	Ddx43	53	32.044
MGP_FVBNJ_G0029869	Ddx55	56	31.429	MGP_FVBNJ_G0016388	Ddx59	54	31.429
MGP_FVBNJ_G0029869	Ddx55	57	35.200	MGP_FVBNJ_G0035327	Ddx3x	54	35.106
MGP_FVBNJ_G0029869	Ddx55	61	30.750	MGP_FVBNJ_G0018685	Ddx52	62	30.750
MGP_FVBNJ_G0029869	Ddx55	58	30.886	MGP_FVBNJ_G0033833	Ddx28	69	30.886
MGP_FVBNJ_G0029869	Ddx55	56	33.056	MGP_FVBNJ_G0033461	Ddx49	92	33.238