EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0030369 (Gene tree)
Gene ID: -
Gene Symbol: Mkrn1
Alias: RFP
Full Name: makorin%2C ring finger protein%2C 1
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 23998 bases
Position: chr6:35735940-35759937
Accession: 1859353
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0076709	zf-CCCH	PF00642.24	1.4e-17	1	3
MGP_FVBNJ_P0076709	zf-CCCH	PF00642.24	1.4e-17	2	3
MGP_FVBNJ_P0076709	zf-CCCH	PF00642.24	1.4e-17	3	3
MGP_FVBNJ_P0076712	zf-CCCH	PF00642.24	1.9e-16	1	3
MGP_FVBNJ_P0076712	zf-CCCH	PF00642.24	1.9e-16	2	3
MGP_FVBNJ_P0076712	zf-CCCH	PF00642.24	1.9e-16	3	3
MGP_FVBNJ_P0076711	zf-CCCH	PF00642.24	1.5e-12	1	2
MGP_FVBNJ_P0076711	zf-CCCH	PF00642.24	1.5e-12	2	2
MGP_FVBNJ_P0076714	zf-CCCH	PF00642.24	1.3e-10	1	2
MGP_FVBNJ_P0076714	zf-CCCH	PF00642.24	1.3e-10	2	2
MGP_FVBNJ_P0076715	zf-CCCH	PF00642.24	3.3e-09	1	2
MGP_FVBNJ_P0076715	zf-CCCH	PF00642.24	3.3e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0076715	-	751	-	MGP_FVBNJ_P0076715	196 (aa)	-	-
MGP_FVBNJ_T0076714	-	542	-	MGP_FVBNJ_P0076714	180 (aa)	-	-
MGP_FVBNJ_T0076711	-	1485	-	MGP_FVBNJ_P0076711	343 (aa)	-	-
MGP_FVBNJ_T0076710	-	773	-	MGP_FVBNJ_P0076710	206 (aa)	-	-
MGP_FVBNJ_T0076713	-	584	-	-	- (aa)	-	-
MGP_FVBNJ_T0076712	-	1511	-	MGP_FVBNJ_P0076712	329 (aa)	-	-
MGP_FVBNJ_T0076709	-	2866	XM_006506396	MGP_FVBNJ_P0076709	481 (aa)	XP_006506459	Q9QXP6

Gene Model

Click here to download MGP_FVBNJ_G0030369's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0030369's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0030369	Mkrn1	83	45.548	MGP_FVBNJ_G0030924	Mkrn2	95	45.679
MGP_FVBNJ_G0030369	Mkrn1	99	40.951	MGP_FVBNJ_G0032108	Mkrn3	83	47.619