EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0030470 (Gene tree)
Gene ID: -
Gene Symbol: Repin1
Alias: AI425994|AP4|Ap4|E430037F08Rik|Zfp-464|Zfp464
Full Name: replication initiator 1
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 5197 bases
Position: chr6:44930075-44935271
Accession: 1889817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0077028	zf-C2H2	PF00096.26	9.5e-68	1	10
MGP_FVBNJ_P0077028	zf-C2H2	PF00096.26	9.5e-68	2	10
MGP_FVBNJ_P0077028	zf-C2H2	PF00096.26	9.5e-68	3	10
MGP_FVBNJ_P0077028	zf-C2H2	PF00096.26	9.5e-68	4	10
MGP_FVBNJ_P0077028	zf-C2H2	PF00096.26	9.5e-68	5	10
MGP_FVBNJ_P0077028	zf-C2H2	PF00096.26	9.5e-68	6	10
MGP_FVBNJ_P0077028	zf-C2H2	PF00096.26	9.5e-68	7	10
MGP_FVBNJ_P0077028	zf-C2H2	PF00096.26	9.5e-68	8	10
MGP_FVBNJ_P0077028	zf-C2H2	PF00096.26	9.5e-68	9	10
MGP_FVBNJ_P0077028	zf-C2H2	PF00096.26	9.5e-68	10	10
MGP_FVBNJ_P0077029	zf-C2H2	PF00096.26	9.5e-68	1	10
MGP_FVBNJ_P0077029	zf-C2H2	PF00096.26	9.5e-68	2	10
MGP_FVBNJ_P0077029	zf-C2H2	PF00096.26	9.5e-68	3	10
MGP_FVBNJ_P0077029	zf-C2H2	PF00096.26	9.5e-68	4	10
MGP_FVBNJ_P0077029	zf-C2H2	PF00096.26	9.5e-68	5	10
MGP_FVBNJ_P0077029	zf-C2H2	PF00096.26	9.5e-68	6	10
MGP_FVBNJ_P0077029	zf-C2H2	PF00096.26	9.5e-68	7	10
MGP_FVBNJ_P0077029	zf-C2H2	PF00096.26	9.5e-68	8	10
MGP_FVBNJ_P0077029	zf-C2H2	PF00096.26	9.5e-68	9	10
MGP_FVBNJ_P0077029	zf-C2H2	PF00096.26	9.5e-68	10	10
MGP_FVBNJ_P0077031	zf-C2H2	PF00096.26	4.7e-67	1	10
MGP_FVBNJ_P0077031	zf-C2H2	PF00096.26	4.7e-67	2	10
MGP_FVBNJ_P0077031	zf-C2H2	PF00096.26	4.7e-67	3	10
MGP_FVBNJ_P0077031	zf-C2H2	PF00096.26	4.7e-67	4	10
MGP_FVBNJ_P0077031	zf-C2H2	PF00096.26	4.7e-67	5	10
MGP_FVBNJ_P0077031	zf-C2H2	PF00096.26	4.7e-67	6	10
MGP_FVBNJ_P0077031	zf-C2H2	PF00096.26	4.7e-67	7	10
MGP_FVBNJ_P0077031	zf-C2H2	PF00096.26	4.7e-67	8	10
MGP_FVBNJ_P0077031	zf-C2H2	PF00096.26	4.7e-67	9	10
MGP_FVBNJ_P0077031	zf-C2H2	PF00096.26	4.7e-67	10	10
MGP_FVBNJ_P0077032	zf-C2H2	PF00096.26	5.1e-67	1	10
MGP_FVBNJ_P0077032	zf-C2H2	PF00096.26	5.1e-67	2	10
MGP_FVBNJ_P0077032	zf-C2H2	PF00096.26	5.1e-67	3	10
MGP_FVBNJ_P0077032	zf-C2H2	PF00096.26	5.1e-67	4	10
MGP_FVBNJ_P0077032	zf-C2H2	PF00096.26	5.1e-67	5	10
MGP_FVBNJ_P0077032	zf-C2H2	PF00096.26	5.1e-67	6	10
MGP_FVBNJ_P0077032	zf-C2H2	PF00096.26	5.1e-67	7	10
MGP_FVBNJ_P0077032	zf-C2H2	PF00096.26	5.1e-67	8	10
MGP_FVBNJ_P0077032	zf-C2H2	PF00096.26	5.1e-67	9	10
MGP_FVBNJ_P0077032	zf-C2H2	PF00096.26	5.1e-67	10	10
MGP_FVBNJ_P0077030	zf-C2H2	PF00096.26	2.7e-32	1	5
MGP_FVBNJ_P0077030	zf-C2H2	PF00096.26	2.7e-32	2	5
MGP_FVBNJ_P0077030	zf-C2H2	PF00096.26	2.7e-32	3	5
MGP_FVBNJ_P0077030	zf-C2H2	PF00096.26	2.7e-32	4	5
MGP_FVBNJ_P0077030	zf-C2H2	PF00096.26	2.7e-32	5	5
MGP_FVBNJ_P0077030	zf-met	PF12874.7	6.1e-07	1	1
MGP_FVBNJ_P0077028	zf-met	PF12874.7	2.3e-06	1	1
MGP_FVBNJ_P0077029	zf-met	PF12874.7	2.3e-06	1	1
MGP_FVBNJ_P0077031	zf-met	PF12874.7	9.6e-06	1	1
MGP_FVBNJ_P0077032	zf-met	PF12874.7	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0077033	-	656	-	-	- (aa)	-	-
MGP_FVBNJ_T0077032	-	3055	-	MGP_FVBNJ_P0077032	601 (aa)	-	-
MGP_FVBNJ_T0077031	-	3136	-	MGP_FVBNJ_P0077031	598 (aa)	-	-
MGP_FVBNJ_T0077030	-	1265	-	MGP_FVBNJ_P0077030	360 (aa)	-	-
MGP_FVBNJ_T0077028	-	3143	-	MGP_FVBNJ_P0077028	545 (aa)	-	Q5U4E2
MGP_FVBNJ_T0077029	-	2957	-	MGP_FVBNJ_P0077029	545 (aa)	-	-
MGP_FVBNJ_T0077036	-	989	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0030470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0030470's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0030470	Repin1	80	31.119	MGP_FVBNJ_G0033745	Zfp319	87	31.818
MGP_FVBNJ_G0030470	Repin1	93	36.340	MGP_FVBNJ_G0031891	-	73	35.756
MGP_FVBNJ_G0030470	Repin1	90	47.287	MGP_FVBNJ_G0029613	Gfi1	99	47.287
MGP_FVBNJ_G0030470	Repin1	99	41.667	MGP_FVBNJ_G0024402	Zfp236	80	44.304
MGP_FVBNJ_G0030470	Repin1	93	36.556	MGP_FVBNJ_G0031902	Zfp715	85	58.140
MGP_FVBNJ_G0030470	Repin1	98	41.250	MGP_FVBNJ_G0018810	Zfp652	73	41.250
MGP_FVBNJ_G0030470	Repin1	95	37.968	MGP_FVBNJ_G0020510	Rslcan18	74	37.968
MGP_FVBNJ_G0030470	Repin1	92	32.235	MGP_FVBNJ_G0020511	Zfp759	90	35.216
MGP_FVBNJ_G0030470	Repin1	96	40.659	MGP_FVBNJ_G0026729	Zfp64	72	40.659
MGP_FVBNJ_G0030470	Repin1	92	44.076	MGP_FVBNJ_G0032811	E430018J23Rik	61	45.876
MGP_FVBNJ_G0030470	Repin1	91	35.831	MGP_FVBNJ_G0018176	Zfp672	92	41.250
MGP_FVBNJ_G0030470	Repin1	55	34.112	MGP_FVBNJ_G0031351	Zfp784	74	38.150
MGP_FVBNJ_G0030470	Repin1	91	34.307	MGP_FVBNJ_G0031630	Zfp574	97	34.430
MGP_FVBNJ_G0030470	Repin1	92	36.705	MGP_FVBNJ_G0023058	Zscan10	78	34.906
MGP_FVBNJ_G0030470	Repin1	93	35.849	MGP_FVBNJ_G0023051	Zfp945	87	35.849
MGP_FVBNJ_G0030470	Repin1	92	36.429	MGP_FVBNJ_G0031599	Zfp61	52	36.429
MGP_FVBNJ_G0030470	Repin1	94	40.367	MGP_FVBNJ_G0031597	Zfp108	74	35.854
MGP_FVBNJ_G0030470	Repin1	93	42.446	MGP_FVBNJ_G0031594	Zfp114	50	42.446
MGP_FVBNJ_G0030470	Repin1	93	39.583	MGP_FVBNJ_G0031595	Zfp111	71	37.624
MGP_FVBNJ_G0030470	Repin1	93	38.832	MGP_FVBNJ_G0031592	Zfp112	53	38.832
MGP_FVBNJ_G0030470	Repin1	98	46.591	MGP_FVBNJ_G0031593	Zfp235	67	34.559
MGP_FVBNJ_G0030470	Repin1	100	47.895	MGP_FVBNJ_G0030950	Zfp637	84	53.704
MGP_FVBNJ_G0030470	Repin1	88	45.000	MGP_FVBNJ_G0032808	Zfp768	51	47.090
MGP_FVBNJ_G0030470	Repin1	94	42.083	MGP_FVBNJ_G0026260	Zfp661	80	42.083
MGP_FVBNJ_G0030470	Repin1	92	45.550	MGP_FVBNJ_G0031340	Zfp628	59	45.545
MGP_FVBNJ_G0030470	Repin1	87	38.710	MGP_FVBNJ_G0031348	Zfp865	84	32.090
MGP_FVBNJ_G0030470	Repin1	93	46.711	MGP_FVBNJ_G0031768	Zfp420	98	46.711
MGP_FVBNJ_G0030470	Repin1	55	46.341	MGP_FVBNJ_G0023036	Gm10226	100	48.193
MGP_FVBNJ_G0030470	Repin1	92	35.733	MGP_FVBNJ_G0023030	Zfp51	82	35.556
MGP_FVBNJ_G0030470	Repin1	95	38.889	MGP_FVBNJ_G0029280	Zbtb49	60	47.222
MGP_FVBNJ_G0030470	Repin1	97	43.114	MGP_FVBNJ_G0031600	Zfp94	75	42.857
MGP_FVBNJ_G0030470	Repin1	93	36.111	MGP_FVBNJ_G0034174	Zfp26	79	36.056
MGP_FVBNJ_G0030470	Repin1	92	35.252	MGP_FVBNJ_G0018082	Zfp454	82	36.599
MGP_FVBNJ_G0030470	Repin1	100	31.719	MGP_FVBNJ_G0033529	Zfp882	87	31.250
MGP_FVBNJ_G0030470	Repin1	93	39.716	MGP_FVBNJ_G0033900	Zfp1	63	39.716
MGP_FVBNJ_G0030470	Repin1	95	46.023	MGP_FVBNJ_G0020090	Zkscan4	57	46.023
MGP_FVBNJ_G0030470	Repin1	95	36.293	MGP_FVBNJ_G0026691	Zfp334	70	38.528
MGP_FVBNJ_G0030470	Repin1	93	38.614	MGP_FVBNJ_G0028827	Zbtb17	63	38.614
MGP_FVBNJ_G0030470	Repin1	91	35.401	MGP_FVBNJ_G0023028	Zfp677	81	37.884
MGP_FVBNJ_G0030470	Repin1	91	33.016	MGP_FVBNJ_G0030604	Prdm5	68	42.361
MGP_FVBNJ_G0030470	Repin1	100	37.079	MGP_FVBNJ_G0018226	Zfp867	93	37.500
MGP_FVBNJ_G0030470	Repin1	92	44.828	MGP_FVBNJ_G0021824	Zfp251	71	38.924
MGP_FVBNJ_G0030470	Repin1	90	46.584	MGP_FVBNJ_G0026916	Mynn	51	44.503