EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0030504 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpa2b1
Alias: 9130414A06Rik|Hnrpa2|Hnrpa2b1|hnrnp-A
Full Name: heterogeneous nuclear ribonucleoprotein A2/B1
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 8964 bases
Position: chr6:47827186-47836149
Accession: 104819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0077166	RRM_1	PF00076.22	3.3e-32	1	2
MGP_FVBNJ_P0077166	RRM_1	PF00076.22	3.3e-32	2	2
MGP_FVBNJ_P0077172	RRM_1	PF00076.22	3.3e-32	1	2
MGP_FVBNJ_P0077172	RRM_1	PF00076.22	3.3e-32	2	2
MGP_FVBNJ_P0077169	RRM_1	PF00076.22	4.9e-32	1	2
MGP_FVBNJ_P0077169	RRM_1	PF00076.22	4.9e-32	2	2
MGP_FVBNJ_P0077173	RRM_1	PF00076.22	4.9e-32	1	2
MGP_FVBNJ_P0077173	RRM_1	PF00076.22	4.9e-32	2	2
MGP_FVBNJ_P0077171	RRM_1	PF00076.22	5.5e-32	1	2
MGP_FVBNJ_P0077171	RRM_1	PF00076.22	5.5e-32	2	2
MGP_FVBNJ_P0077175	RRM_1	PF00076.22	1.8e-15	1	1
MGP_FVBNJ_P0077175	HnRNPA1	PF11627.8	1.9e-16	1	1
MGP_FVBNJ_P0077166	HnRNPA1	PF11627.8	2.1e-06	1	1
MGP_FVBNJ_P0077172	HnRNPA1	PF11627.8	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0077175	-	466	-	MGP_FVBNJ_P0077175	154 (aa)	-	-
MGP_FVBNJ_T0077169	-	1662	-	MGP_FVBNJ_P0077169	341 (aa)	-	-
MGP_FVBNJ_T0077168	-	1542	-	MGP_FVBNJ_P0077168	301 (aa)	-	-
MGP_FVBNJ_T0077178	-	3645	-	-	- (aa)	-	-
MGP_FVBNJ_T0077176	-	706	-	-	- (aa)	-	-
MGP_FVBNJ_T0077177	-	596	-	-	- (aa)	-	-
MGP_FVBNJ_T0077167	-	1703	-	MGP_FVBNJ_P0077167	353 (aa)	-	-
MGP_FVBNJ_T0077166	-	1647	XM_006506373	MGP_FVBNJ_P0077166	301 (aa)	XP_006506436	O88569
MGP_FVBNJ_T0077172	-	1518	-	MGP_FVBNJ_P0077172	301 (aa)	-	-
MGP_FVBNJ_T0077173	-	1638	-	MGP_FVBNJ_P0077173	341 (aa)	-	-
MGP_FVBNJ_T0077170	-	1554	-	-	- (aa)	-	-
MGP_FVBNJ_T0077171	-	1728	-	MGP_FVBNJ_P0077171	353 (aa)	-	-
MGP_FVBNJ_T0077174	-	766	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0030504's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0030504's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0030504	Hnrnpa2b1	69	31.776	MGP_FVBNJ_G0015880	Boll	64	37.500
MGP_FVBNJ_G0030504	Hnrnpa2b1	91	41.379	MGP_FVBNJ_G0029738	Msi1	61	43.750
MGP_FVBNJ_G0030504	Hnrnpa2b1	56	38.554	MGP_FVBNJ_G0035499	Rbmx	90	40.299
MGP_FVBNJ_G0030504	Hnrnpa2b1	59	83.516	MGP_FVBNJ_G0025662	Hnrnpa3	59	74.752
MGP_FVBNJ_G0030504	Hnrnpa2b1	72	41.148	MGP_FVBNJ_G0029552	Hnrnpd	97	44.545
MGP_FVBNJ_G0030504	Hnrnpa2b1	58	38.824	MGP_FVBNJ_G0029554	Hnrnpdl	58	38.542
MGP_FVBNJ_G0030504	Hnrnpa2b1	56	48.193	MGP_FVBNJ_G0018747	Msi2	100	44.348
MGP_FVBNJ_G0030504	Hnrnpa2b1	66	32.143	MGP_FVBNJ_G0034657	Celf6	79	31.250
MGP_FVBNJ_G0030504	Hnrnpa2b1	60	41.026	MGP_FVBNJ_G0017327	Dazap1	99	40.237
MGP_FVBNJ_G0030504	Hnrnpa2b1	50	44.737	MGP_FVBNJ_G0017321	Cirbp	70	44.737
MGP_FVBNJ_G0030504	Hnrnpa2b1	91	55.970	MGP_FVBNJ_G0020656	Gm17190	73	58.113
MGP_FVBNJ_G0030504	Hnrnpa2b1	61	38.068	MGP_FVBNJ_G0018097	Hnrnpab	64	37.368
MGP_FVBNJ_G0030504	Hnrnpa2b1	59	55.307	MGP_FVBNJ_G0020438	Hnrnpa0	73	53.608
MGP_FVBNJ_G0030504	Hnrnpa2b1	66	30.348	MGP_FVBNJ_G0028906	Tardbp	94	30.282