EuRBPDB

Description

Ensembl ID: MGP_FVBNJ_G0030599 (Gene tree)
Gene ID: -
Gene Symbol: Smarcad1
Alias: AV081750|AW226546|D6Pas1|Etl1|Kiaa1122|mKIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 77460 bases
Position: chr6:61348188-61425647
Accession: 95453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0077501	ResIII	PF04851.15	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0077513	-	643	-	-	- (aa)	-	-
MGP_FVBNJ_T0077509	-	643	-	-	- (aa)	-	-
MGP_FVBNJ_T0077508	-	4179	-	MGP_FVBNJ_P0077508	123 (aa)	-	-
MGP_FVBNJ_T0077507	-	2821	-	-	- (aa)	-	-
MGP_FVBNJ_T0077506	-	739	-	MGP_FVBNJ_P0077506	73 (aa)	-	-
MGP_FVBNJ_T0077505	-	472	-	MGP_FVBNJ_P0077505	68 (aa)	-	-
MGP_FVBNJ_T0077504	-	734	-	MGP_FVBNJ_P0077504	73 (aa)	-	-
MGP_FVBNJ_T0077503	-	600	-	MGP_FVBNJ_P0077503	73 (aa)	-	-
MGP_FVBNJ_T0077502	-	466	-	-	- (aa)	-	-
MGP_FVBNJ_T0077501	-	5168	-	MGP_FVBNJ_P0077501	1021 (aa)	-	-
MGP_FVBNJ_T0077500	-	602	XM_006505509	MGP_FVBNJ_P0077500	134 (aa)	XP_006505572	Q04692
MGP_FVBNJ_T0077510	-	635	-	-	- (aa)	-	-
MGP_FVBNJ_T0077511	-	726	-	MGP_FVBNJ_P0077511	45 (aa)	-	-
MGP_FVBNJ_T0077512	-	3062	-	-	- (aa)	-	-
MGP_FVBNJ_T0077514	-	2526	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0030599	Smarcad1	50	30.112	MGP_FVBNJ_G0028397	Rad54l	66	30.112
MGP_FVBNJ_G0030599	Smarcad1	50	35.135	MGP_FVBNJ_G0027432	Chd1l	51	35.135
MGP_FVBNJ_G0030599	Smarcad1	51	37.705	MGP_FVBNJ_G0024899	Hells	66	37.887