EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_FVBNJ_G0030998 (Gene tree)
Gene ID
-
Gene Symbol
Apobec1
Alias
Cdar1
Full Name
apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide 1
Gene Type
protein_coding
Species
Mus_musculus_fvbnj
Status
putative
Strand
Minus strand
Length
24747 bases
Position
chr6:118782597-118807343
Accession
103298
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_FVBNJ_P0079536APOBEC_NPF08210.118.3e-3011
MGP_FVBNJ_P0079537APOBEC_NPF08210.118.3e-3011
MGP_FVBNJ_P0079538APOBEC_NPF08210.118.3e-3011
MGP_FVBNJ_P0079539APOBEC_NPF08210.114.2e-1711
MGP_FVBNJ_P0079540APOBEC_NPF08210.113.1e-1311
MGP_FVBNJ_P0079536APOBEC_CPF05240.141.8e-2211
MGP_FVBNJ_P0079537APOBEC_CPF05240.141.8e-2211
MGP_FVBNJ_P0079538APOBEC_CPF05240.141.8e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_FVBNJ_T0079538-2127-MGP_FVBNJ_P0079538229 (aa)--
MGP_FVBNJ_T0079539-666-MGP_FVBNJ_P0079539121 (aa)--
MGP_FVBNJ_T0079536-2265XM_006505401MGP_FVBNJ_P0079536229 (aa)XP_006505464P51908
MGP_FVBNJ_T0079537-2072-MGP_FVBNJ_P0079537229 (aa)--
MGP_FVBNJ_T0079541-372-MGP_FVBNJ_P007954143 (aa)--
MGP_FVBNJ_T0079540-775-MGP_FVBNJ_P0079540113 (aa)--
MGP_FVBNJ_T0079543-560--- (aa)--
MGP_FVBNJ_T0079542-360-MGP_FVBNJ_P007954225 (aa)--
MGP_FVBNJ_T0079544-520--- (aa)--
Gene Model
Click here to download MGP_FVBNJ_G0030998's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0030998's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_FVBNJ_G0030998Apobec17434.737MGP_FVBNJ_G0021899Apobec38438.028
MGP_FVBNJ_G0030998Apobec15639.706MGP_FVBNJ_G0030997Aicda5341.509

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