EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0031597 (Gene tree)
Gene ID: -
Gene Symbol: Zfp108
Alias: -
Full Name: zinc finger protein 108
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 7698 bases
Position: chr7:21921006-21928703
Accession: 1891198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0081745	zf-C2H2	PF00096.26	7.7e-66	1	12
MGP_FVBNJ_P0081745	zf-C2H2	PF00096.26	7.7e-66	2	12
MGP_FVBNJ_P0081745	zf-C2H2	PF00096.26	7.7e-66	3	12
MGP_FVBNJ_P0081745	zf-C2H2	PF00096.26	7.7e-66	4	12
MGP_FVBNJ_P0081745	zf-C2H2	PF00096.26	7.7e-66	5	12
MGP_FVBNJ_P0081745	zf-C2H2	PF00096.26	7.7e-66	6	12
MGP_FVBNJ_P0081745	zf-C2H2	PF00096.26	7.7e-66	7	12
MGP_FVBNJ_P0081745	zf-C2H2	PF00096.26	7.7e-66	8	12
MGP_FVBNJ_P0081745	zf-C2H2	PF00096.26	7.7e-66	9	12
MGP_FVBNJ_P0081745	zf-C2H2	PF00096.26	7.7e-66	10	12
MGP_FVBNJ_P0081745	zf-C2H2	PF00096.26	7.7e-66	11	12
MGP_FVBNJ_P0081745	zf-C2H2	PF00096.26	7.7e-66	12	12
MGP_FVBNJ_P0081743	zf-C2H2	PF00096.26	7.7e-66	1	12
MGP_FVBNJ_P0081743	zf-C2H2	PF00096.26	7.7e-66	2	12
MGP_FVBNJ_P0081743	zf-C2H2	PF00096.26	7.7e-66	3	12
MGP_FVBNJ_P0081743	zf-C2H2	PF00096.26	7.7e-66	4	12
MGP_FVBNJ_P0081743	zf-C2H2	PF00096.26	7.7e-66	5	12
MGP_FVBNJ_P0081743	zf-C2H2	PF00096.26	7.7e-66	6	12
MGP_FVBNJ_P0081743	zf-C2H2	PF00096.26	7.7e-66	7	12
MGP_FVBNJ_P0081743	zf-C2H2	PF00096.26	7.7e-66	8	12
MGP_FVBNJ_P0081743	zf-C2H2	PF00096.26	7.7e-66	9	12
MGP_FVBNJ_P0081743	zf-C2H2	PF00096.26	7.7e-66	10	12
MGP_FVBNJ_P0081743	zf-C2H2	PF00096.26	7.7e-66	11	12
MGP_FVBNJ_P0081743	zf-C2H2	PF00096.26	7.7e-66	12	12
MGP_FVBNJ_P0081744	zf-C2H2	PF00096.26	7.7e-66	1	12
MGP_FVBNJ_P0081744	zf-C2H2	PF00096.26	7.7e-66	2	12
MGP_FVBNJ_P0081744	zf-C2H2	PF00096.26	7.7e-66	3	12
MGP_FVBNJ_P0081744	zf-C2H2	PF00096.26	7.7e-66	4	12
MGP_FVBNJ_P0081744	zf-C2H2	PF00096.26	7.7e-66	5	12
MGP_FVBNJ_P0081744	zf-C2H2	PF00096.26	7.7e-66	6	12
MGP_FVBNJ_P0081744	zf-C2H2	PF00096.26	7.7e-66	7	12
MGP_FVBNJ_P0081744	zf-C2H2	PF00096.26	7.7e-66	8	12
MGP_FVBNJ_P0081744	zf-C2H2	PF00096.26	7.7e-66	9	12
MGP_FVBNJ_P0081744	zf-C2H2	PF00096.26	7.7e-66	10	12
MGP_FVBNJ_P0081744	zf-C2H2	PF00096.26	7.7e-66	11	12
MGP_FVBNJ_P0081744	zf-C2H2	PF00096.26	7.7e-66	12	12
MGP_FVBNJ_P0081745	zf-met	PF12874.7	9.9e-10	1	1
MGP_FVBNJ_P0081743	zf-met	PF12874.7	9.9e-10	1	1
MGP_FVBNJ_P0081744	zf-met	PF12874.7	9.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0081744	-	2577	-	MGP_FVBNJ_P0081744	642 (aa)	-	-
MGP_FVBNJ_T0081745	-	1929	-	MGP_FVBNJ_P0081745	642 (aa)	-	-
MGP_FVBNJ_T0081743	-	2562	XM_017322371	MGP_FVBNJ_P0081743	642 (aa)	XP_017177860	E9Q8I5

Gene Model

Click here to download MGP_FVBNJ_G0031597's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0031597's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0031597	Zfp108	99	47.765	MGP_FVBNJ_G0034174	Zfp26	90	47.765
MGP_FVBNJ_G0031597	Zfp108	73	43.119	MGP_FVBNJ_G0024402	Zfp236	65	43.119
MGP_FVBNJ_G0031597	Zfp108	72	41.329	MGP_FVBNJ_G0033745	Zfp319	97	36.496
MGP_FVBNJ_G0031597	Zfp108	99	43.564	MGP_FVBNJ_G0026691	Zfp334	73	52.083
MGP_FVBNJ_G0031597	Zfp108	79	55.556	MGP_FVBNJ_G0031768	Zfp420	99	55.556
MGP_FVBNJ_G0031597	Zfp108	69	53.957	MGP_FVBNJ_G0032808	Zfp768	51	53.521
MGP_FVBNJ_G0031597	Zfp108	99	51.133	MGP_FVBNJ_G0031599	Zfp61	99	51.133
MGP_FVBNJ_G0031597	Zfp108	99	62.162	MGP_FVBNJ_G0031595	Zfp111	99	62.162
MGP_FVBNJ_G0031597	Zfp108	99	68.978	MGP_FVBNJ_G0031594	Zfp114	98	66.899
MGP_FVBNJ_G0031597	Zfp108	99	57.908	MGP_FVBNJ_G0031592	Zfp112	99	57.908
MGP_FVBNJ_G0031597	Zfp108	99	75.075	MGP_FVBNJ_G0031593	Zfp235	100	63.134
MGP_FVBNJ_G0031597	Zfp108	69	41.564	MGP_FVBNJ_G0018176	Zfp672	90	50.746
MGP_FVBNJ_G0031597	Zfp108	70	52.000	MGP_FVBNJ_G0020090	Zkscan4	56	52.000
MGP_FVBNJ_G0031597	Zfp108	74	35.854	MGP_FVBNJ_G0030470	Repin1	94	40.367
MGP_FVBNJ_G0031597	Zfp108	99	52.381	MGP_FVBNJ_G0026260	Zfp661	97	52.381
MGP_FVBNJ_G0031597	Zfp108	99	50.696	MGP_FVBNJ_G0018082	Zfp454	98	50.167
MGP_FVBNJ_G0031597	Zfp108	99	47.480	MGP_FVBNJ_G0023028	Zfp677	98	47.480
MGP_FVBNJ_G0031597	Zfp108	66	47.143	MGP_FVBNJ_G0029280	Zbtb49	59	49.296
MGP_FVBNJ_G0031597	Zfp108	99	45.299	MGP_FVBNJ_G0032811	E430018J23Rik	91	45.299
MGP_FVBNJ_G0031597	Zfp108	99	45.926	MGP_FVBNJ_G0032810	Zfp747	90	45.926
MGP_FVBNJ_G0031597	Zfp108	66	38.115	MGP_FVBNJ_G0030604	Prdm5	93	38.115
MGP_FVBNJ_G0031597	Zfp108	60	53.448	MGP_FVBNJ_G0030950	Zfp637	74	51.042
MGP_FVBNJ_G0031597	Zfp108	65	45.000	MGP_FVBNJ_G0029613	Gfi1	100	50.427
MGP_FVBNJ_G0031597	Zfp108	66	43.860	MGP_FVBNJ_G0031348	Zfp865	80	30.684
MGP_FVBNJ_G0031597	Zfp108	61	35.465	MGP_FVBNJ_G0031349	-	68	30.120
MGP_FVBNJ_G0031597	Zfp108	77	48.077	MGP_FVBNJ_G0031340	Zfp628	62	48.503
MGP_FVBNJ_G0031597	Zfp108	99	49.309	MGP_FVBNJ_G0033900	Zfp1	100	49.309
MGP_FVBNJ_G0031597	Zfp108	99	48.848	MGP_FVBNJ_G0023030	Zfp51	95	48.848
MGP_FVBNJ_G0031597	Zfp108	66	38.095	MGP_FVBNJ_G0026729	Zfp64	73	34.472
MGP_FVBNJ_G0031597	Zfp108	65	38.741	MGP_FVBNJ_G0023058	Zscan10	78	39.344
MGP_FVBNJ_G0031597	Zfp108	99	44.159	MGP_FVBNJ_G0023051	Zfp945	99	44.159
MGP_FVBNJ_G0031597	Zfp108	71	47.443	MGP_FVBNJ_G0018226	Zfp867	95	53.659
MGP_FVBNJ_G0031597	Zfp108	99	44.652	MGP_FVBNJ_G0033529	Zfp882	99	46.400
MGP_FVBNJ_G0031597	Zfp108	99	49.747	MGP_FVBNJ_G0021824	Zfp251	95	50.137
MGP_FVBNJ_G0031597	Zfp108	67	60.976	MGP_FVBNJ_G0031900	Zfp141	52	60.976
MGP_FVBNJ_G0031597	Zfp108	78	54.348	MGP_FVBNJ_G0031902	Zfp715	66	59.524
MGP_FVBNJ_G0031597	Zfp108	99	47.000	MGP_FVBNJ_G0020511	Zfp759	100	47.000
MGP_FVBNJ_G0031597	Zfp108	99	54.622	MGP_FVBNJ_G0020510	Rslcan18	79	55.814
MGP_FVBNJ_G0031597	Zfp108	71	42.208	MGP_FVBNJ_G0031630	Zfp574	62	42.763
MGP_FVBNJ_G0031597	Zfp108	99	57.846	MGP_FVBNJ_G0031600	Zfp94	97	52.756
MGP_FVBNJ_G0031597	Zfp108	99	49.682	MGP_FVBNJ_G0031891	-	86	54.902