EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0031605 (Gene tree)
Gene ID: -
Gene Symbol: Irgc1
Alias: F630044M05Rik|Gm1102|Gm474|Ifgge|Iigp5|Irgc|LOC210145|LOC381989
Full Name: immunity-related GTPase family%2C cinema 1
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 21800 bases
Position: chr7:22107106-22128905
Accession: 2685948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0081777	MMR_HSR1	PF01926.23	6.3e-06	1	1
MGP_FVBNJ_P0081778	MMR_HSR1	PF01926.23	6.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0081779	-	383	-	MGP_FVBNJ_P0081779	82 (aa)	-	-
MGP_FVBNJ_T0081778	-	1737	-	MGP_FVBNJ_P0081778	463 (aa)	-	-
MGP_FVBNJ_T0081781	-	342	-	-	- (aa)	-	-
MGP_FVBNJ_T0081777	-	1835	XM_006539708	MGP_FVBNJ_P0081777	463 (aa)	XP_006539771	A0A0U1RQ16
MGP_FVBNJ_T0081780	-	661	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0031605's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0031605's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0031605	Irgc1	71	30.183	MGP_FVBNJ_G0018037	Irgm1	76	35.169
MGP_FVBNJ_G0031605	Irgc1	65	33.775	MGP_FVBNJ_G0018172	Igtp	68	33.775
MGP_FVBNJ_G0031605	Irgc1	62	32.872	MGP_FVBNJ_G0018173	Irgm2	69	32.872
MGP_FVBNJ_G0031605	Irgc1	82	34.635	MGP_FVBNJ_G0018044	-	89	34.635
MGP_FVBNJ_G0031605	Irgc1	82	33.158	MGP_FVBNJ_G0024260	Iigp1	90	33.158
MGP_FVBNJ_G0031605	Irgc1	50	42.424	MGP_FVBNJ_G0018040	-	66	42.424
MGP_FVBNJ_G0031605	Irgc1	68	41.401	MGP_FVBNJ_G0018045	Ifi47	75	41.401
MGP_FVBNJ_G0031605	Irgc1	82	34.635	MGP_FVBNJ_G0018043	-	89	34.635
MGP_FVBNJ_G0031605	Irgc1	68	36.909	MGP_FVBNJ_G0024258	Gm4951	77	36.909
MGP_FVBNJ_G0031605	Irgc1	82	34.211	MGP_FVBNJ_G0024259	F830016B08Rik	88	34.211