EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0031768 (Gene tree)
Gene ID: -
Gene Symbol: Zfp420
Alias: B230119D13|B230312I18Rik|mszf59-1|mszf70
Full Name: zinc finger protein 420
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 17253 bases
Position: chr7:27898340-27915592
Accession: 2444666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0082423	zf-C2H2	PF00096.26	2.6e-113	1	18
MGP_FVBNJ_P0082423	zf-C2H2	PF00096.26	2.6e-113	2	18
MGP_FVBNJ_P0082423	zf-C2H2	PF00096.26	2.6e-113	3	18
MGP_FVBNJ_P0082423	zf-C2H2	PF00096.26	2.6e-113	4	18
MGP_FVBNJ_P0082423	zf-C2H2	PF00096.26	2.6e-113	5	18
MGP_FVBNJ_P0082423	zf-C2H2	PF00096.26	2.6e-113	6	18
MGP_FVBNJ_P0082423	zf-C2H2	PF00096.26	2.6e-113	7	18
MGP_FVBNJ_P0082423	zf-C2H2	PF00096.26	2.6e-113	8	18
MGP_FVBNJ_P0082423	zf-C2H2	PF00096.26	2.6e-113	9	18
MGP_FVBNJ_P0082423	zf-C2H2	PF00096.26	2.6e-113	10	18
MGP_FVBNJ_P0082423	zf-C2H2	PF00096.26	2.6e-113	11	18
MGP_FVBNJ_P0082423	zf-C2H2	PF00096.26	2.6e-113	12	18
MGP_FVBNJ_P0082423	zf-C2H2	PF00096.26	2.6e-113	13	18
MGP_FVBNJ_P0082423	zf-C2H2	PF00096.26	2.6e-113	14	18
MGP_FVBNJ_P0082423	zf-C2H2	PF00096.26	2.6e-113	15	18
MGP_FVBNJ_P0082423	zf-C2H2	PF00096.26	2.6e-113	16	18
MGP_FVBNJ_P0082423	zf-C2H2	PF00096.26	2.6e-113	17	18
MGP_FVBNJ_P0082423	zf-C2H2	PF00096.26	2.6e-113	18	18
MGP_FVBNJ_P0082426	zf-C2H2	PF00096.26	2.6e-113	1	18
MGP_FVBNJ_P0082426	zf-C2H2	PF00096.26	2.6e-113	2	18
MGP_FVBNJ_P0082426	zf-C2H2	PF00096.26	2.6e-113	3	18
MGP_FVBNJ_P0082426	zf-C2H2	PF00096.26	2.6e-113	4	18
MGP_FVBNJ_P0082426	zf-C2H2	PF00096.26	2.6e-113	5	18
MGP_FVBNJ_P0082426	zf-C2H2	PF00096.26	2.6e-113	6	18
MGP_FVBNJ_P0082426	zf-C2H2	PF00096.26	2.6e-113	7	18
MGP_FVBNJ_P0082426	zf-C2H2	PF00096.26	2.6e-113	8	18
MGP_FVBNJ_P0082426	zf-C2H2	PF00096.26	2.6e-113	9	18
MGP_FVBNJ_P0082426	zf-C2H2	PF00096.26	2.6e-113	10	18
MGP_FVBNJ_P0082426	zf-C2H2	PF00096.26	2.6e-113	11	18
MGP_FVBNJ_P0082426	zf-C2H2	PF00096.26	2.6e-113	12	18
MGP_FVBNJ_P0082426	zf-C2H2	PF00096.26	2.6e-113	13	18
MGP_FVBNJ_P0082426	zf-C2H2	PF00096.26	2.6e-113	14	18
MGP_FVBNJ_P0082426	zf-C2H2	PF00096.26	2.6e-113	15	18
MGP_FVBNJ_P0082426	zf-C2H2	PF00096.26	2.6e-113	16	18
MGP_FVBNJ_P0082426	zf-C2H2	PF00096.26	2.6e-113	17	18
MGP_FVBNJ_P0082426	zf-C2H2	PF00096.26	2.6e-113	18	18
MGP_FVBNJ_P0082423	zf-met	PF12874.7	8.3e-08	1	1
MGP_FVBNJ_P0082426	zf-met	PF12874.7	8.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0082424	-	689	-	-	- (aa)	-	-
MGP_FVBNJ_T0082425	-	2982	-	-	- (aa)	-	-
MGP_FVBNJ_T0082426	-	2744	-	MGP_FVBNJ_P0082426	578 (aa)	-	-
MGP_FVBNJ_T0082427	-	768	-	-	- (aa)	-	-
MGP_FVBNJ_T0082423	-	2537	XM_006539873	MGP_FVBNJ_P0082423	578 (aa)	XP_006539936	Q7TMN8

Gene Model

Click here to download MGP_FVBNJ_G0031768's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0031768's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0031768	Zfp420	98	50.000	MGP_FVBNJ_G0033529	Zfp882	85	50.000
MGP_FVBNJ_G0031768	Zfp420	97	56.897	MGP_FVBNJ_G0030950	Zfp637	75	54.167
MGP_FVBNJ_G0031768	Zfp420	97	49.194	MGP_FVBNJ_G0029613	Gfi1	100	48.507
MGP_FVBNJ_G0031768	Zfp420	99	56.115	MGP_FVBNJ_G0032808	Zfp768	51	56.071
MGP_FVBNJ_G0031768	Zfp420	99	56.356	MGP_FVBNJ_G0031599	Zfp61	59	56.356
MGP_FVBNJ_G0031768	Zfp420	99	55.556	MGP_FVBNJ_G0031597	Zfp108	79	55.556
MGP_FVBNJ_G0031768	Zfp420	98	55.274	MGP_FVBNJ_G0031595	Zfp111	74	55.274
MGP_FVBNJ_G0031768	Zfp420	99	56.553	MGP_FVBNJ_G0031593	Zfp235	73	56.553
MGP_FVBNJ_G0031768	Zfp420	98	53.074	MGP_FVBNJ_G0031592	Zfp112	67	53.074
MGP_FVBNJ_G0031768	Zfp420	95	59.426	MGP_FVBNJ_G0026260	Zfp661	72	59.426
MGP_FVBNJ_G0031768	Zfp420	99	57.692	MGP_FVBNJ_G0033900	Zfp1	78	57.692
MGP_FVBNJ_G0031768	Zfp420	98	46.711	MGP_FVBNJ_G0030470	Repin1	93	46.711
MGP_FVBNJ_G0031768	Zfp420	97	47.917	MGP_FVBNJ_G0032810	Zfp747	54	47.917
MGP_FVBNJ_G0031768	Zfp420	95	41.722	MGP_FVBNJ_G0030604	Prdm5	91	48.387
MGP_FVBNJ_G0031768	Zfp420	99	53.480	MGP_FVBNJ_G0031594	Zfp114	64	53.480
MGP_FVBNJ_G0031768	Zfp420	99	37.634	MGP_FVBNJ_G0031348	Zfp865	80	37.634
MGP_FVBNJ_G0031768	Zfp420	95	30.691	MGP_FVBNJ_G0031349	-	66	31.343
MGP_FVBNJ_G0031768	Zfp420	98	38.136	MGP_FVBNJ_G0031340	Zfp628	60	38.748
MGP_FVBNJ_G0031768	Zfp420	99	46.512	MGP_FVBNJ_G0024402	Zfp236	79	46.512
MGP_FVBNJ_G0031768	Zfp420	99	52.489	MGP_FVBNJ_G0026691	Zfp334	75	51.716
MGP_FVBNJ_G0031768	Zfp420	98	57.678	MGP_FVBNJ_G0031900	Zfp141	74	57.678
MGP_FVBNJ_G0031768	Zfp420	99	51.052	MGP_FVBNJ_G0031902	Zfp715	71	51.316
MGP_FVBNJ_G0031768	Zfp420	99	51.196	MGP_FVBNJ_G0020511	Zfp759	88	50.364
MGP_FVBNJ_G0031768	Zfp420	99	57.095	MGP_FVBNJ_G0031600	Zfp94	82	57.095
MGP_FVBNJ_G0031768	Zfp420	99	59.854	MGP_FVBNJ_G0031891	-	78	59.854
MGP_FVBNJ_G0031768	Zfp420	98	51.882	MGP_FVBNJ_G0018226	Zfp867	82	51.882
MGP_FVBNJ_G0031768	Zfp420	98	56.275	MGP_FVBNJ_G0020510	Rslcan18	71	56.275
MGP_FVBNJ_G0031768	Zfp420	99	60.656	MGP_FVBNJ_G0021824	Zfp251	78	60.656
MGP_FVBNJ_G0031768	Zfp420	98	37.309	MGP_FVBNJ_G0033745	Zfp319	93	36.919
MGP_FVBNJ_G0031768	Zfp420	99	36.677	MGP_FVBNJ_G0031630	Zfp574	93	37.533
MGP_FVBNJ_G0031768	Zfp420	97	44.706	MGP_FVBNJ_G0028827	Zbtb17	69	44.706
MGP_FVBNJ_G0031768	Zfp420	98	47.967	MGP_FVBNJ_G0032811	E430018J23Rik	67	47.967
MGP_FVBNJ_G0031768	Zfp420	98	55.319	MGP_FVBNJ_G0023030	Zfp51	89	55.319
MGP_FVBNJ_G0031768	Zfp420	98	59.532	MGP_FVBNJ_G0018082	Zfp454	71	57.803
MGP_FVBNJ_G0031768	Zfp420	98	39.286	MGP_FVBNJ_G0026729	Zfp64	69	36.504
MGP_FVBNJ_G0031768	Zfp420	98	49.524	MGP_FVBNJ_G0018176	Zfp672	89	49.524
MGP_FVBNJ_G0031768	Zfp420	99	51.210	MGP_FVBNJ_G0020090	Zkscan4	56	52.239
MGP_FVBNJ_G0031768	Zfp420	98	54.648	MGP_FVBNJ_G0023028	Zfp677	89	54.648
MGP_FVBNJ_G0031768	Zfp420	99	55.773	MGP_FVBNJ_G0034174	Zfp26	80	55.773
MGP_FVBNJ_G0031768	Zfp420	97	41.080	MGP_FVBNJ_G0023058	Zscan10	78	40.179
MGP_FVBNJ_G0031768	Zfp420	99	49.905	MGP_FVBNJ_G0023051	Zfp945	97	50.469
MGP_FVBNJ_G0031768	Zfp420	98	48.744	MGP_FVBNJ_G0029280	Zbtb49	89	50.000