EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0031807 (Gene tree)
Gene ID: -
Gene Symbol: U2af1l4
Alias: AA407033|AF419339|AI451269|AW553050|U2af26|auxiliary factor 26
Full Name: U2 small nuclear RNA auxiliary factor 1-like 4
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 4660 bases
Position: chr7:28628109-28632768
Accession: 2678374
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0082596	zf-CCCH	PF00642.24	3e-13	1	2
MGP_FVBNJ_P0082596	zf-CCCH	PF00642.24	3e-13	2	2
MGP_FVBNJ_P0082595	zf-CCCH	PF00642.24	3.1e-13	1	2
MGP_FVBNJ_P0082595	zf-CCCH	PF00642.24	3.1e-13	2	2
MGP_FVBNJ_P0082578	zf-CCCH	PF00642.24	3.9e-13	1	2
MGP_FVBNJ_P0082578	zf-CCCH	PF00642.24	3.9e-13	2	2
MGP_FVBNJ_P0082575	zf-CCCH	PF00642.24	4.4e-13	1	2
MGP_FVBNJ_P0082575	zf-CCCH	PF00642.24	4.4e-13	2	2
MGP_FVBNJ_P0082594	zf-CCCH	PF00642.24	6e-09	1	1
MGP_FVBNJ_P0082576	zf-CCCH	PF00642.24	1.2e-06	1	1
MGP_FVBNJ_P0082609	zf-CCCH	PF00642.24	6.3e-06	1	1
MGP_FVBNJ_P0082595	RRM_1	PF00076.22	1.2e-07	1	1
MGP_FVBNJ_P0082599	RRM_1	PF00076.22	1.2e-07	1	1
MGP_FVBNJ_P0082609	RRM_1	PF00076.22	2.8e-07	1	1
MGP_FVBNJ_P0082576	RRM_1	PF00076.22	3.2e-07	1	1
MGP_FVBNJ_P0082578	RRM_1	PF00076.22	3.5e-07	1	1
MGP_FVBNJ_P0082594	RRM_1	PF00076.22	3.9e-07	1	1
MGP_FVBNJ_P0082575	RRM_1	PF00076.22	4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0082608	-	202	-	-	- (aa)	-	-
MGP_FVBNJ_T0082609	-	582	-	MGP_FVBNJ_P0082609	193 (aa)	-	-
MGP_FVBNJ_T0082600	-	382	-	-	- (aa)	-	-
MGP_FVBNJ_T0082601	-	519	-	-	- (aa)	-	-
MGP_FVBNJ_T0082602	-	399	-	-	- (aa)	-	-
MGP_FVBNJ_T0082603	-	728	-	-	- (aa)	-	-
MGP_FVBNJ_T0082604	-	568	-	-	- (aa)	-	-
MGP_FVBNJ_T0082605	-	500	-	MGP_FVBNJ_P0082605	24 (aa)	-	-
MGP_FVBNJ_T0082606	-	572	-	MGP_FVBNJ_P0082606	52 (aa)	-	-
MGP_FVBNJ_T0082607	-	626	-	-	- (aa)	-	-
MGP_FVBNJ_T0082589	-	668	-	MGP_FVBNJ_P0082589	55 (aa)	-	-
MGP_FVBNJ_T0082588	-	629	-	-	- (aa)	-	-
MGP_FVBNJ_T0082583	-	883	-	MGP_FVBNJ_P0082583	37 (aa)	-	-
MGP_FVBNJ_T0082582	-	566	-	MGP_FVBNJ_P0082582	46 (aa)	-	-
MGP_FVBNJ_T0082581	-	502	-	MGP_FVBNJ_P0082581	37 (aa)	-	-
MGP_FVBNJ_T0082580	-	656	-	-	- (aa)	-	-
MGP_FVBNJ_T0082587	-	3007	-	MGP_FVBNJ_P0082587	220 (aa)	-	-
MGP_FVBNJ_T0082586	-	505	-	MGP_FVBNJ_P0082586	37 (aa)	-	-
MGP_FVBNJ_T0082585	-	874	-	-	- (aa)	-	-
MGP_FVBNJ_T0082584	-	410	-	-	- (aa)	-	-
MGP_FVBNJ_T0082576	-	781	-	MGP_FVBNJ_P0082576	188 (aa)	-	-
MGP_FVBNJ_T0082577	-	715	-	-	- (aa)	-	-
MGP_FVBNJ_T0082574	-	439	-	MGP_FVBNJ_P0082574	37 (aa)	-	-
MGP_FVBNJ_T0082575	-	884	-	MGP_FVBNJ_P0082575	220 (aa)	-	-
MGP_FVBNJ_T0082572	-	747	-	-	- (aa)	-	-
MGP_FVBNJ_T0082573	-	583	-	-	- (aa)	-	-
MGP_FVBNJ_T0082578	-	835	-	MGP_FVBNJ_P0082578	210 (aa)	-	-
MGP_FVBNJ_T0082579	-	635	-	-	- (aa)	-	-
MGP_FVBNJ_T0082594	-	651	-	MGP_FVBNJ_P0082594	216 (aa)	-	-
MGP_FVBNJ_T0082595	-	546	-	MGP_FVBNJ_P0082595	181 (aa)	-	-
MGP_FVBNJ_T0082596	-	564	-	MGP_FVBNJ_P0082596	187 (aa)	-	-
MGP_FVBNJ_T0082597	-	590	-	MGP_FVBNJ_P0082597	102 (aa)	-	-
MGP_FVBNJ_T0082590	-	562	-	-	- (aa)	-	-
MGP_FVBNJ_T0082591	-	860	-	-	- (aa)	-	-
MGP_FVBNJ_T0082592	-	2890	-	MGP_FVBNJ_P0082592	146 (aa)	-	-
MGP_FVBNJ_T0082593	-	2721	-	MGP_FVBNJ_P0082593	220 (aa)	-	-
MGP_FVBNJ_T0082598	-	353	-	-	- (aa)	-	-
MGP_FVBNJ_T0082599	-	405	-	MGP_FVBNJ_P0082599	119 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0031807's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0031807's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0031807	U2af1l4	100	90.385	MGP_FVBNJ_G0023292	U2af1	66	82.266