EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0031891 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 32934 bases
Position: chr7:40010865-40043798
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0083000	zf-C2H2	PF00096.26	4.5e-80	1	14
MGP_FVBNJ_P0083000	zf-C2H2	PF00096.26	4.5e-80	2	14
MGP_FVBNJ_P0083000	zf-C2H2	PF00096.26	4.5e-80	3	14
MGP_FVBNJ_P0083000	zf-C2H2	PF00096.26	4.5e-80	4	14
MGP_FVBNJ_P0083000	zf-C2H2	PF00096.26	4.5e-80	5	14
MGP_FVBNJ_P0083000	zf-C2H2	PF00096.26	4.5e-80	6	14
MGP_FVBNJ_P0083000	zf-C2H2	PF00096.26	4.5e-80	7	14
MGP_FVBNJ_P0083000	zf-C2H2	PF00096.26	4.5e-80	8	14
MGP_FVBNJ_P0083000	zf-C2H2	PF00096.26	4.5e-80	9	14
MGP_FVBNJ_P0083000	zf-C2H2	PF00096.26	4.5e-80	10	14
MGP_FVBNJ_P0083000	zf-C2H2	PF00096.26	4.5e-80	11	14
MGP_FVBNJ_P0083000	zf-C2H2	PF00096.26	4.5e-80	12	14
MGP_FVBNJ_P0083000	zf-C2H2	PF00096.26	4.5e-80	13	14
MGP_FVBNJ_P0083000	zf-C2H2	PF00096.26	4.5e-80	14	14
MGP_FVBNJ_P0083000	zf-met	PF12874.7	2.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0082999	-	514	-	-	- (aa)	-	-
MGP_FVBNJ_T0083001	-	284	-	-	- (aa)	-	-
MGP_FVBNJ_T0083000	-	3518	-	MGP_FVBNJ_P0083000	672 (aa)	-	-
MGP_FVBNJ_T0083003	-	574	-	-	- (aa)	-	-
MGP_FVBNJ_T0083002	-	594	-	MGP_FVBNJ_P0083002	71 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0031891's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0031891's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0031891	-	97	52.885	MGP_FVBNJ_G0031600	Zfp94	97	52.885
MGP_FVBNJ_G0031891	-	78	59.854	MGP_FVBNJ_G0031768	Zfp420	99	59.854
MGP_FVBNJ_G0031891	-	100	81.003	MGP_FVBNJ_G0031900	Zfp141	79	81.003
MGP_FVBNJ_G0031891	-	97	50.638	MGP_FVBNJ_G0031902	Zfp715	95	50.638
MGP_FVBNJ_G0031891	-	71	46.429	MGP_FVBNJ_G0024402	Zfp236	67	46.429
MGP_FVBNJ_G0031891	-	97	52.747	MGP_FVBNJ_G0032810	Zfp747	88	52.747
MGP_FVBNJ_G0031891	-	100	46.565	MGP_FVBNJ_G0032811	E430018J23Rik	93	46.565
MGP_FVBNJ_G0031891	-	78	36.719	MGP_FVBNJ_G0026729	Zfp64	69	36.554
MGP_FVBNJ_G0031891	-	97	49.220	MGP_FVBNJ_G0033529	Zfp882	99	49.220
MGP_FVBNJ_G0031891	-	70	48.276	MGP_FVBNJ_G0029613	Gfi1	100	50.467
MGP_FVBNJ_G0031891	-	72	54.182	MGP_FVBNJ_G0032808	Zfp768	51	53.381
MGP_FVBNJ_G0031891	-	97	51.678	MGP_FVBNJ_G0034174	Zfp26	96	51.678
MGP_FVBNJ_G0031891	-	69	39.057	MGP_FVBNJ_G0030604	Prdm5	76	39.057
MGP_FVBNJ_G0031891	-	70	49.223	MGP_FVBNJ_G0029280	Zbtb49	62	51.389
MGP_FVBNJ_G0031891	-	97	53.199	MGP_FVBNJ_G0020510	Rslcan18	79	53.199
MGP_FVBNJ_G0031891	-	97	43.769	MGP_FVBNJ_G0020511	Zfp759	99	44.737
MGP_FVBNJ_G0031891	-	79	56.034	MGP_FVBNJ_G0030950	Zfp637	87	55.172
MGP_FVBNJ_G0031891	-	98	45.432	MGP_FVBNJ_G0026691	Zfp334	99	45.432
MGP_FVBNJ_G0031891	-	78	42.342	MGP_FVBNJ_G0023058	Zscan10	80	42.342
MGP_FVBNJ_G0031891	-	98	52.294	MGP_FVBNJ_G0033900	Zfp1	99	52.294
MGP_FVBNJ_G0031891	-	97	54.949	MGP_FVBNJ_G0021824	Zfp251	94	54.949
MGP_FVBNJ_G0031891	-	70	43.041	MGP_FVBNJ_G0018176	Zfp672	90	43.750
MGP_FVBNJ_G0031891	-	69	30.531	MGP_FVBNJ_G0031348	Zfp865	78	33.333
MGP_FVBNJ_G0031891	-	67	34.615	MGP_FVBNJ_G0031340	Zfp628	60	35.055
MGP_FVBNJ_G0031891	-	99	52.166	MGP_FVBNJ_G0023030	Zfp51	95	54.334
MGP_FVBNJ_G0031891	-	67	38.000	MGP_FVBNJ_G0031630	Zfp574	71	38.000
MGP_FVBNJ_G0031891	-	99	50.565	MGP_FVBNJ_G0018082	Zfp454	99	50.565
MGP_FVBNJ_G0031891	-	78	37.744	MGP_FVBNJ_G0033745	Zfp319	96	37.662
MGP_FVBNJ_G0031891	-	97	55.079	MGP_FVBNJ_G0023051	Zfp945	98	55.079
MGP_FVBNJ_G0031891	-	86	54.902	MGP_FVBNJ_G0031597	Zfp108	99	49.682
MGP_FVBNJ_G0031891	-	97	47.714	MGP_FVBNJ_G0031594	Zfp114	97	47.714
MGP_FVBNJ_G0031891	-	97	48.963	MGP_FVBNJ_G0031595	Zfp111	98	48.963
MGP_FVBNJ_G0031891	-	78	44.939	MGP_FVBNJ_G0031592	Zfp112	99	49.686
MGP_FVBNJ_G0031891	-	97	55.607	MGP_FVBNJ_G0031593	Zfp235	99	55.607
MGP_FVBNJ_G0031891	-	87	51.244	MGP_FVBNJ_G0031599	Zfp61	71	51.244
MGP_FVBNJ_G0031891	-	99	53.279	MGP_FVBNJ_G0026260	Zfp661	97	53.279
MGP_FVBNJ_G0031891	-	78	51.136	MGP_FVBNJ_G0020090	Zkscan4	56	51.136
MGP_FVBNJ_G0031891	-	97	50.877	MGP_FVBNJ_G0018226	Zfp867	95	50.877
MGP_FVBNJ_G0031891	-	67	47.260	MGP_FVBNJ_G0028827	Zbtb17	58	47.260
MGP_FVBNJ_G0031891	-	73	35.756	MGP_FVBNJ_G0030470	Repin1	93	36.340
MGP_FVBNJ_G0031891	-	99	53.972	MGP_FVBNJ_G0023028	Zfp677	99	50.110