EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0032289 (Gene tree)
Gene ID: -
Gene Symbol: Rab30
Alias: 5033421K01Rik|AI323892|Rsb30
Full Name: RAB30%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 93092 bases
Position: chr7:91187241-91280332
Accession: 1923235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0084576	MMR_HSR1	PF01926.23	2.3e-05	1	1
MGP_FVBNJ_P0084577	MMR_HSR1	PF01926.23	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0084578	-	1304	-	MGP_FVBNJ_P0084578	175 (aa)	-	-
MGP_FVBNJ_T0084576	-	2039	XM_006508293	MGP_FVBNJ_P0084576	203 (aa)	XP_006508356	Q923S9
MGP_FVBNJ_T0084577	-	1406	-	MGP_FVBNJ_P0084577	203 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0032289's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0032289's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0032289	Rab30	95	38.889	MGP_FVBNJ_G0036009	Rab9	97	38.889
MGP_FVBNJ_G0032289	Rab30	79	42.857	MGP_FVBNJ_G0032349	Rab6a	77	42.857
MGP_FVBNJ_G0032289	Rab30	88	47.778	MGP_FVBNJ_G0023781	Rab12	62	47.778
MGP_FVBNJ_G0032289	Rab30	97	41.546	MGP_FVBNJ_G0027195	Rab25	96	41.546
MGP_FVBNJ_G0032289	Rab30	81	47.059	MGP_FVBNJ_G0026992	Rab33b	74	47.059
MGP_FVBNJ_G0032289	Rab30	82	50.000	MGP_FVBNJ_G0024493	Rab1b	83	50.000
MGP_FVBNJ_G0032289	Rab30	79	41.615	MGP_FVBNJ_G0034954	Rab6b	77	41.615
MGP_FVBNJ_G0032289	Rab30	78	48.447	MGP_FVBNJ_G0035613	Rab39b	76	48.447
MGP_FVBNJ_G0032289	Rab30	80	48.466	MGP_FVBNJ_G0019195	Rab37	75	48.466
MGP_FVBNJ_G0032289	Rab30	79	34.756	MGP_FVBNJ_G0022049	Rabl2	70	34.756
MGP_FVBNJ_G0032289	Rab30	87	33.146	MGP_FVBNJ_G0031251	Kras	93	33.146
MGP_FVBNJ_G0032289	Rab30	81	32.317	MGP_FVBNJ_G0031358	Rasl2-9	75	32.317
MGP_FVBNJ_G0032289	Rab30	84	45.614	MGP_FVBNJ_G0021106	Rab2b	81	48.718
MGP_FVBNJ_G0032289	Rab30	89	34.426	MGP_FVBNJ_G0032988	Hras	94	34.426
MGP_FVBNJ_G0032289	Rab30	90	42.391	MGP_FVBNJ_G0027821	Rab2a	87	42.391
MGP_FVBNJ_G0032289	Rab30	83	47.929	MGP_FVBNJ_G0023927	Rab18	82	47.929
MGP_FVBNJ_G0032289	Rab30	81	33.735	MGP_FVBNJ_G0034931	Mras	79	33.735
MGP_FVBNJ_G0032289	Rab30	79	39.157	MGP_FVBNJ_G0035852	Rab9b	82	39.157
MGP_FVBNJ_G0032289	Rab30	83	42.857	MGP_FVBNJ_G0017710	Rab5b	78	42.857
MGP_FVBNJ_G0032289	Rab30	80	42.331	MGP_FVBNJ_G0026758	Rab22a	84	42.331
MGP_FVBNJ_G0032289	Rab30	97	37.981	MGP_FVBNJ_G0034698	Rab11a	91	44.604
MGP_FVBNJ_G0032289	Rab30	84	34.503	MGP_FVBNJ_G0027476	Nras	96	34.932
MGP_FVBNJ_G0032289	Rab30	89	40.556	MGP_FVBNJ_G0025457	Rab14	91	43.478
MGP_FVBNJ_G0032289	Rab30	86	41.954	MGP_FVBNJ_G0019682	Rab15	82	41.954
MGP_FVBNJ_G0032289	Rab30	83	42.012	MGP_FVBNJ_G0018989	Rab5c	78	42.012
MGP_FVBNJ_G0032289	Rab30	97	39.524	MGP_FVBNJ_G0023335	Rab11b	93	44.604
MGP_FVBNJ_G0032289	Rab30	78	38.272	MGP_FVBNJ_G0017181	Rab36	61	38.272
MGP_FVBNJ_G0032289	Rab30	81	51.176	MGP_FVBNJ_G0035444	Rab33a	72	51.176
MGP_FVBNJ_G0032289	Rab30	82	31.737	MGP_FVBNJ_G0029129	Rheb	88	31.737
MGP_FVBNJ_G0032289	Rab30	76	42.857	MGP_FVBNJ_G0023772	Rab31	79	42.857
MGP_FVBNJ_G0032289	Rab30	77	35.625	MGP_FVBNJ_G0018590	Rab34	62	35.625
MGP_FVBNJ_G0032289	Rab30	86	43.678	MGP_FVBNJ_G0023683	Rab5a	81	43.678
MGP_FVBNJ_G0032289	Rab30	82	50.602	MGP_FVBNJ_G0017895	Rab1a	81	50.602