EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0032349 (Gene tree)
Gene ID: -
Gene Symbol: Rab6a
Alias: 2610028L11Rik|AA419671|Rab6|Rab6 {ECO:0000313|EMBL:EDL16462.1,GN ECO:0000313|MGI:MGI:894313}|Rab6 {ECO:0000313|EMBL:EDL16464.1,GN ECO:0000313|MGI:MGI:894313}|Rab6A
Full Name: RAB6A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 34180 bases
Position: chr7:99005613-99039792
Accession: 894313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0084828	MMR_HSR1	PF01926.23	9.1e-05	1	1
MGP_FVBNJ_P0084829	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0084830	-	567	-	-	- (aa)	-	-
MGP_FVBNJ_T0084828	-	3210	-	MGP_FVBNJ_P0084828	208 (aa)	-	-
MGP_FVBNJ_T0084829	-	3106	-	MGP_FVBNJ_P0084829	208 (aa)	-	-
MGP_FVBNJ_T0084827	-	2613	-	MGP_FVBNJ_P0084827	175 (aa)	-	P35279

Gene Model

Click here to download MGP_FVBNJ_G0032349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0032349's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0032349	Rab6a	93	38.384	MGP_FVBNJ_G0024493	Rab1b	96	38.384
MGP_FVBNJ_G0032349	Rab6a	94	36.150	MGP_FVBNJ_G0017181	Rab36	80	36.150
MGP_FVBNJ_G0032349	Rab6a	91	38.462	MGP_FVBNJ_G0027821	Rab2a	89	38.462
MGP_FVBNJ_G0032349	Rab6a	77	30.769	MGP_FVBNJ_G0030152	Rasl11a	69	30.769
MGP_FVBNJ_G0032349	Rab6a	79	33.721	MGP_FVBNJ_G0035852	Rab9b	84	33.721
MGP_FVBNJ_G0032349	Rab6a	80	38.922	MGP_FVBNJ_G0023772	Rab31	86	38.922
MGP_FVBNJ_G0032349	Rab6a	84	35.955	MGP_FVBNJ_G0034698	Rab11a	84	38.281
MGP_FVBNJ_G0032349	Rab6a	76	32.500	MGP_FVBNJ_G0034931	Mras	76	32.500
MGP_FVBNJ_G0032349	Rab6a	76	40.252	MGP_FVBNJ_G0023781	Rab12	55	40.252
MGP_FVBNJ_G0032349	Rab6a	94	35.784	MGP_FVBNJ_G0026992	Rab33b	86	35.784
MGP_FVBNJ_G0032349	Rab6a	95	37.561	MGP_FVBNJ_G0035444	Rab33a	86	37.561
MGP_FVBNJ_G0032349	Rab6a	100	90.865	MGP_FVBNJ_G0034954	Rab6b	100	90.865
MGP_FVBNJ_G0032349	Rab6a	84	44.000	MGP_FVBNJ_G0018989	Rab5c	81	44.000
MGP_FVBNJ_G0032349	Rab6a	98	41.546	MGP_FVBNJ_G0023683	Rab5a	95	41.546
MGP_FVBNJ_G0032349	Rab6a	95	30.151	MGP_FVBNJ_G0032988	Hras	98	30.151
MGP_FVBNJ_G0032349	Rab6a	75	39.623	MGP_FVBNJ_G0035613	Rab39b	75	39.623
MGP_FVBNJ_G0032349	Rab6a	94	36.232	MGP_FVBNJ_G0025457	Rab14	95	36.232
MGP_FVBNJ_G0032349	Rab6a	56	30.000	MGP_FVBNJ_G0019032	Arl4d	58	30.000
MGP_FVBNJ_G0032349	Rab6a	81	39.053	MGP_FVBNJ_G0026758	Rab22a	87	39.053
MGP_FVBNJ_G0032349	Rab6a	75	32.911	MGP_FVBNJ_G0027476	Nras	98	33.557
MGP_FVBNJ_G0032349	Rab6a	94	38.384	MGP_FVBNJ_G0017895	Rab1a	94	38.384
MGP_FVBNJ_G0032349	Rab6a	75	38.217	MGP_FVBNJ_G0023335	Rab11b	91	37.778
MGP_FVBNJ_G0032349	Rab6a	77	40.828	MGP_FVBNJ_G0021106	Rab2b	79	43.421
MGP_FVBNJ_G0032349	Rab6a	88	34.239	MGP_FVBNJ_G0027195	Rab25	86	34.239
MGP_FVBNJ_G0032349	Rab6a	90	36.458	MGP_FVBNJ_G0019682	Rab15	91	36.458
MGP_FVBNJ_G0032349	Rab6a	75	32.278	MGP_FVBNJ_G0031251	Kras	83	32.278
MGP_FVBNJ_G0032349	Rab6a	85	37.634	MGP_FVBNJ_G0018590	Rab34	72	37.634
MGP_FVBNJ_G0032349	Rab6a	88	31.915	MGP_FVBNJ_G0022049	Rabl2	83	31.915
MGP_FVBNJ_G0032349	Rab6a	93	35.500	MGP_FVBNJ_G0036009	Rab9	96	35.500
MGP_FVBNJ_G0032349	Rab6a	95	36.634	MGP_FVBNJ_G0023927	Rab18	94	36.634
MGP_FVBNJ_G0032349	Rab6a	75	35.625	MGP_FVBNJ_G0029129	Rheb	85	35.625
MGP_FVBNJ_G0032349	Rab6a	77	42.857	MGP_FVBNJ_G0019195	Rab37	75	42.857
MGP_FVBNJ_G0032349	Rab6a	77	42.857	MGP_FVBNJ_G0032289	Rab30	79	42.857
MGP_FVBNJ_G0032349	Rab6a	80	45.181	MGP_FVBNJ_G0017710	Rab5b	77	45.181