EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0032735 (Gene tree)
Gene ID: -
Gene Symbol: Tnrc6a
Alias: 2010321I05Rik|3110054G10Rik|AW557223|CAGH26|D130023A07Rik|GW182|Tnrc6
Full Name: trinucleotide repeat containing 6a
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 69843 bases
Position: chr7:121788064-121857906
Accession: 2385292
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0085917	Ago_hook	PF10427.9	4.7e-19	1	1
MGP_FVBNJ_P0085914	Ago_hook	PF10427.9	5.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0085913	-	313	-	MGP_FVBNJ_P0085913	53 (aa)	-	-
MGP_FVBNJ_T0085912	-	643	-	-	- (aa)	-	-
MGP_FVBNJ_T0085915	-	3577	-	MGP_FVBNJ_P0085915	35 (aa)	-	-
MGP_FVBNJ_T0085914	-	8458	-	MGP_FVBNJ_P0085914	1880 (aa)	-	-
MGP_FVBNJ_T0085917	-	5223	-	MGP_FVBNJ_P0085917	1397 (aa)	-	-
MGP_FVBNJ_T0085916	-	1783	-	-	- (aa)	-	-
MGP_FVBNJ_T0085919	-	939	-	-	- (aa)	-	-
MGP_FVBNJ_T0085918	-	4311	-	-	- (aa)	-	-
MGP_FVBNJ_T0085922	-	3297	-	-	- (aa)	-	-
MGP_FVBNJ_T0085920	-	605	-	-	- (aa)	-	-
MGP_FVBNJ_T0085921	-	463	-	MGP_FVBNJ_P0085921	154 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0032735's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0032735's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0032735	Tnrc6a	98	44.482	MGP_FVBNJ_G0019272	Tnrc6c	99	40.570
MGP_FVBNJ_G0032735	Tnrc6a	99	39.739	MGP_FVBNJ_G0021913	Tnrc6b	98	37.170