EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0032802 (Gene tree)
Gene ID: -
Gene Symbol: Sept1
Alias: Diff6|PNUTL3|Pnutl3
Full Name: septin 1
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 18565 bases
Position: chr7:125870971-125889535
Accession: 1858916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0086328	MMR_HSR1	PF01926.23	2e-08	1	1
MGP_FVBNJ_P0086327	MMR_HSR1	PF01926.23	3.5e-08	1	1
MGP_FVBNJ_P0086325	MMR_HSR1	PF01926.23	5.1e-08	1	1
MGP_FVBNJ_P0086324	MMR_HSR1	PF01926.23	5.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0086323	-	575	-	-	- (aa)	-	-
MGP_FVBNJ_T0086327	-	706	-	MGP_FVBNJ_P0086327	186 (aa)	-	-
MGP_FVBNJ_T0086326	-	789	-	-	- (aa)	-	-
MGP_FVBNJ_T0086325	-	1048	-	MGP_FVBNJ_P0086325	328 (aa)	-	-
MGP_FVBNJ_T0086324	-	1101	-	MGP_FVBNJ_P0086324	366 (aa)	-	-
MGP_FVBNJ_T0086329	-	821	-	-	- (aa)	-	-
MGP_FVBNJ_T0086328	-	599	-	MGP_FVBNJ_P0086328	145 (aa)	-	-
MGP_FVBNJ_T0086330	-	242	-	-	- (aa)	-	-
MGP_FVBNJ_T0086331	-	713	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0032802's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0032802's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0032802	Sept1	100	43.537	MGP_FVBNJ_G0017085	Sept10	71	40.064
MGP_FVBNJ_G0032802	Sept1	100	47.260	MGP_FVBNJ_G0022288	Sept12	77	43.775
MGP_FVBNJ_G0032802	Sept1	100	66.897	MGP_FVBNJ_G0018728	Sept4	99	64.516
MGP_FVBNJ_G0032802	Sept1	100	64.828	MGP_FVBNJ_G0016187	Sept2	100	60.748
MGP_FVBNJ_G0032802	Sept1	100	40.816	MGP_FVBNJ_G0029530	Sept11	76	40.762
MGP_FVBNJ_G0032802	Sept1	100	59.310	MGP_FVBNJ_G0034252	Sept7	76	49.709
MGP_FVBNJ_G0032802	Sept1	100	38.095	MGP_FVBNJ_G0018126	Sept8	76	36.765
MGP_FVBNJ_G0032802	Sept1	100	50.000	MGP_FVBNJ_G0019270	Sept9	83	46.000
MGP_FVBNJ_G0032802	Sept1	100	50.685	MGP_FVBNJ_G0021947	Sept3	86	46.575
MGP_FVBNJ_G0032802	Sept1	100	40.136	MGP_FVBNJ_G0035383	Sept6	76	41.349
MGP_FVBNJ_G0032802	Sept1	100	68.276	MGP_FVBNJ_G0022425	Sept5	93	63.068