EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0032811 (Gene tree)
Gene ID: -
Gene Symbol: E430018J23Rik
Alias: AI480612
Full Name: RIKEN cDNA E430018J23 gene
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 4332 bases
Position: chr7:126055170-126059501
Accession: 2141981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0086352	zf-C2H2	PF00096.26	1.8e-48	1	9
MGP_FVBNJ_P0086352	zf-C2H2	PF00096.26	1.8e-48	2	9
MGP_FVBNJ_P0086352	zf-C2H2	PF00096.26	1.8e-48	3	9
MGP_FVBNJ_P0086352	zf-C2H2	PF00096.26	1.8e-48	4	9
MGP_FVBNJ_P0086352	zf-C2H2	PF00096.26	1.8e-48	5	9
MGP_FVBNJ_P0086352	zf-C2H2	PF00096.26	1.8e-48	6	9
MGP_FVBNJ_P0086352	zf-C2H2	PF00096.26	1.8e-48	7	9
MGP_FVBNJ_P0086352	zf-C2H2	PF00096.26	1.8e-48	8	9
MGP_FVBNJ_P0086352	zf-C2H2	PF00096.26	1.8e-48	9	9
MGP_FVBNJ_P0086352	zf-met	PF12874.7	6.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0086352	-	3307	XM_006507163	MGP_FVBNJ_P0086352	458 (aa)	XP_006507226	D3Z3V4

Gene Model

Click here to download MGP_FVBNJ_G0032811's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0032811's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0032811	E430018J23Rik	86	35.468	MGP_FVBNJ_G0033900	Zfp1	98	35.468
MGP_FVBNJ_G0032811	E430018J23Rik	73	42.308	MGP_FVBNJ_G0028827	Zbtb17	55	41.129
MGP_FVBNJ_G0032811	E430018J23Rik	61	48.421	MGP_FVBNJ_G0031340	Zfp628	60	47.264
MGP_FVBNJ_G0032811	E430018J23Rik	61	35.593	MGP_FVBNJ_G0031348	Zfp865	72	35.593
MGP_FVBNJ_G0032811	E430018J23Rik	93	46.565	MGP_FVBNJ_G0031891	-	100	46.565
MGP_FVBNJ_G0032811	E430018J23Rik	61	47.511	MGP_FVBNJ_G0032808	Zfp768	50	47.321
MGP_FVBNJ_G0032811	E430018J23Rik	91	45.909	MGP_FVBNJ_G0023030	Zfp51	95	45.909
MGP_FVBNJ_G0032811	E430018J23Rik	61	42.798	MGP_FVBNJ_G0018176	Zfp672	90	42.105
MGP_FVBNJ_G0032811	E430018J23Rik	72	32.389	MGP_FVBNJ_G0026729	Zfp64	70	32.389
MGP_FVBNJ_G0032811	E430018J23Rik	92	41.985	MGP_FVBNJ_G0023028	Zfp677	99	41.985
MGP_FVBNJ_G0032811	E430018J23Rik	62	45.000	MGP_FVBNJ_G0029280	Zbtb49	64	47.945
MGP_FVBNJ_G0032811	E430018J23Rik	67	47.967	MGP_FVBNJ_G0031768	Zfp420	98	47.967
MGP_FVBNJ_G0032811	E430018J23Rik	93	70.492	MGP_FVBNJ_G0032810	Zfp747	95	70.492
MGP_FVBNJ_G0032811	E430018J23Rik	71	42.177	MGP_FVBNJ_G0024402	Zfp236	58	42.177
MGP_FVBNJ_G0032811	E430018J23Rik	79	43.254	MGP_FVBNJ_G0023058	Zscan10	78	43.254
MGP_FVBNJ_G0032811	E430018J23Rik	95	42.073	MGP_FVBNJ_G0023051	Zfp945	98	42.073
MGP_FVBNJ_G0032811	E430018J23Rik	88	47.895	MGP_FVBNJ_G0026260	Zfp661	94	42.286
MGP_FVBNJ_G0032811	E430018J23Rik	89	50.000	MGP_FVBNJ_G0034174	Zfp26	89	50.000
MGP_FVBNJ_G0032811	E430018J23Rik	86	41.333	MGP_FVBNJ_G0020511	Zfp759	99	41.333
MGP_FVBNJ_G0032811	E430018J23Rik	90	47.390	MGP_FVBNJ_G0020510	Rslcan18	82	47.390
MGP_FVBNJ_G0032811	E430018J23Rik	80	45.070	MGP_FVBNJ_G0031902	Zfp715	73	44.550
MGP_FVBNJ_G0032811	E430018J23Rik	57	44.503	MGP_FVBNJ_G0030950	Zfp637	71	44.503
MGP_FVBNJ_G0032811	E430018J23Rik	85	46.119	MGP_FVBNJ_G0031600	Zfp94	96	46.119
MGP_FVBNJ_G0032811	E430018J23Rik	86	36.765	MGP_FVBNJ_G0033745	Zfp319	93	39.245
MGP_FVBNJ_G0032811	E430018J23Rik	90	50.382	MGP_FVBNJ_G0021824	Zfp251	94	50.382
MGP_FVBNJ_G0032811	E430018J23Rik	63	37.838	MGP_FVBNJ_G0030604	Prdm5	74	37.838
MGP_FVBNJ_G0032811	E430018J23Rik	73	42.197	MGP_FVBNJ_G0029613	Gfi1	99	45.038
MGP_FVBNJ_G0032811	E430018J23Rik	89	46.964	MGP_FVBNJ_G0031595	Zfp111	98	46.964
MGP_FVBNJ_G0032811	E430018J23Rik	58	47.639	MGP_FVBNJ_G0031594	Zfp114	65	47.639
MGP_FVBNJ_G0032811	E430018J23Rik	91	45.299	MGP_FVBNJ_G0031597	Zfp108	99	45.299
MGP_FVBNJ_G0032811	E430018J23Rik	89	48.879	MGP_FVBNJ_G0031593	Zfp235	63	48.879
MGP_FVBNJ_G0032811	E430018J23Rik	83	47.410	MGP_FVBNJ_G0031592	Zfp112	66	47.410
MGP_FVBNJ_G0032811	E430018J23Rik	60	48.341	MGP_FVBNJ_G0031599	Zfp61	52	48.341
MGP_FVBNJ_G0032811	E430018J23Rik	54	38.421	MGP_FVBNJ_G0018810	Zfp652	51	33.016
MGP_FVBNJ_G0032811	E430018J23Rik	61	45.876	MGP_FVBNJ_G0030470	Repin1	92	44.076
MGP_FVBNJ_G0032811	E430018J23Rik	87	44.000	MGP_FVBNJ_G0026691	Zfp334	99	44.000
MGP_FVBNJ_G0032811	E430018J23Rik	59	42.857	MGP_FVBNJ_G0020090	Zkscan4	51	42.460
MGP_FVBNJ_G0032811	E430018J23Rik	86	43.798	MGP_FVBNJ_G0033529	Zfp882	99	43.798
MGP_FVBNJ_G0032811	E430018J23Rik	89	44.019	MGP_FVBNJ_G0018082	Zfp454	99	44.019
MGP_FVBNJ_G0032811	E430018J23Rik	86	39.583	MGP_FVBNJ_G0018226	Zfp867	95	39.583
MGP_FVBNJ_G0032811	E430018J23Rik	76	46.360	MGP_FVBNJ_G0031900	Zfp141	58	46.360
MGP_FVBNJ_G0032811	E430018J23Rik	58	44.086	MGP_FVBNJ_G0031630	Zfp574	71	38.961