EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0086602	RRM_1	PF00076.22	2.2e-63	1	3
MGP_FVBNJ_P0086602	RRM_1	PF00076.22	2.2e-63	2	3
MGP_FVBNJ_P0086602	RRM_1	PF00076.22	2.2e-63	3	3
MGP_FVBNJ_P0086604	RRM_1	PF00076.22	2.2e-63	1	3
MGP_FVBNJ_P0086604	RRM_1	PF00076.22	2.2e-63	2	3
MGP_FVBNJ_P0086604	RRM_1	PF00076.22	2.2e-63	3	3
MGP_FVBNJ_P0086599	RRM_1	PF00076.22	3.1e-60	1	3
MGP_FVBNJ_P0086599	RRM_1	PF00076.22	3.1e-60	2	3
MGP_FVBNJ_P0086599	RRM_1	PF00076.22	3.1e-60	3	3
MGP_FVBNJ_P0086601	RRM_1	PF00076.22	7.5e-51	1	3
MGP_FVBNJ_P0086601	RRM_1	PF00076.22	7.5e-51	2	3
MGP_FVBNJ_P0086601	RRM_1	PF00076.22	7.5e-51	3	3
MGP_FVBNJ_P0086607	RRM_1	PF00076.22	1.8e-26	1	2
MGP_FVBNJ_P0086607	RRM_1	PF00076.22	1.8e-26	2	2
MGP_FVBNJ_P0086605	RRM_1	PF00076.22	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0086604	-	1580	-	MGP_FVBNJ_P0086604	375 (aa)	-	-
MGP_FVBNJ_T0086605	-	562	-	MGP_FVBNJ_P0086605	107 (aa)	-	-
MGP_FVBNJ_T0086606	-	2319	-	MGP_FVBNJ_P0086606	135 (aa)	-	-
MGP_FVBNJ_T0086607	-	1344	-	MGP_FVBNJ_P0086607	244 (aa)	-	-
MGP_FVBNJ_T0086600	-	4262	-	-	- (aa)	-	-
MGP_FVBNJ_T0086601	-	2835	-	MGP_FVBNJ_P0086601	336 (aa)	-	-
MGP_FVBNJ_T0086602	-	2033	-	MGP_FVBNJ_P0086602	375 (aa)	-	-
MGP_FVBNJ_T0086603	-	953	-	MGP_FVBNJ_P0086603	106 (aa)	-	-
MGP_FVBNJ_T0086599	-	4447	XM_006507570	MGP_FVBNJ_P0086599	392 (aa)	XP_006507633	P70318
MGP_FVBNJ_T0086611	-	1808	-	-	- (aa)	-	-
MGP_FVBNJ_T0086610	-	804	-	MGP_FVBNJ_P0086610	140 (aa)	-	-
MGP_FVBNJ_T0086608	-	784	-	MGP_FVBNJ_P0086608	41 (aa)	-	-
MGP_FVBNJ_T0086609	-	560	-	-	- (aa)	-	-
MGP_FVBNJ_T0086612	-	674	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0032858	Tial1	73	37.179	MGP_FVBNJ_G0034229	Elavl3	90	37.179
MGP_FVBNJ_G0032858	Tial1	73	32.000	MGP_FVBNJ_G0027125	Rbm46	52	30.000
MGP_FVBNJ_G0032858	Tial1	67	40.244	MGP_FVBNJ_G0017321	Cirbp	85	40.244
MGP_FVBNJ_G0032858	Tial1	64	31.461	MGP_FVBNJ_G0035499	Rbmx	90	32.258
MGP_FVBNJ_G0032858	Tial1	94	31.783	MGP_FVBNJ_G0022945	Pabpc6	56	34.014
MGP_FVBNJ_G0032858	Tial1	65	31.481	MGP_FVBNJ_G0025138	Celf2	61	34.177
MGP_FVBNJ_G0032858	Tial1	53	32.143	MGP_FVBNJ_G0034657	Celf6	54	31.818
MGP_FVBNJ_G0032858	Tial1	67	30.769	MGP_FVBNJ_G0033102	Elavl1	95	30.769
MGP_FVBNJ_G0032858	Tial1	100	87.440	MGP_FVBNJ_G0030747	Tia1	97	86.992
MGP_FVBNJ_G0032858	Tial1	94	30.233	MGP_FVBNJ_G0028517	Pabpc4	100	34.167
MGP_FVBNJ_G0032858	Tial1	72	34.615	MGP_FVBNJ_G0028225	Elavl2	93	34.615
MGP_FVBNJ_G0032858	Tial1	73	35.897	MGP_FVBNJ_G0028357	Elavl4	88	35.897
MGP_FVBNJ_G0032858	Tial1	94	31.008	MGP_FVBNJ_G0021609	Pabpc1	56	35.556
MGP_FVBNJ_G0032858	Tial1	81	31.111	MGP_FVBNJ_G0019294	Rbfox3	53	31.868
MGP_FVBNJ_G0032858	Tial1	99	31.618	MGP_FVBNJ_G0026984	Pabpc4l	94	33.333
MGP_FVBNJ_G0032858	Tial1	69	31.469	MGP_FVBNJ_G0029738	Msi1	56	41.379
MGP_FVBNJ_G0032858	Tial1	92	32.500	MGP_FVBNJ_G0024168	Pabpc2	50	35.036
MGP_FVBNJ_G0032858	Tial1	81	37.333	MGP_FVBNJ_G0027344	Celf3	70	34.091
MGP_FVBNJ_G0032858	Tial1	73	33.019	MGP_FVBNJ_G0028646	Trnau1ap	60	32.386
MGP_FVBNJ_G0032858	Tial1	62	32.184	MGP_FVBNJ_G0022535	Ncbp2	71	33.333