EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0087628	RRM_5	PF13893.6	2.8e-10	1	2
MGP_FVBNJ_P0087628	RRM_5	PF13893.6	2.8e-10	2	2
MGP_FVBNJ_P0087628	RRM_1	PF00076.22	1.1e-61	1	3
MGP_FVBNJ_P0087628	RRM_1	PF00076.22	1.1e-61	2	3
MGP_FVBNJ_P0087628	RRM_1	PF00076.22	1.1e-61	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0087628	-	6030	XM_006508698	MGP_FVBNJ_P0087628	326 (aa)	XP_006508761	P70372

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0033102	Elavl1	50	33.333	MGP_FVBNJ_G0018097	Hnrnpab	53	33.333
MGP_FVBNJ_G0033102	Elavl1	74	32.000	MGP_FVBNJ_G0027415	Rbm8a	62	32.000
MGP_FVBNJ_G0033102	Elavl1	95	33.553	MGP_FVBNJ_G0028517	Pabpc4	99	34.848
MGP_FVBNJ_G0033102	Elavl1	95	66.265	MGP_FVBNJ_G0034229	Elavl3	90	66.867
MGP_FVBNJ_G0033102	Elavl1	95	30.769	MGP_FVBNJ_G0032858	Tial1	67	30.769
MGP_FVBNJ_G0033102	Elavl1	91	30.464	MGP_FVBNJ_G0026984	Pabpc4l	94	30.464
MGP_FVBNJ_G0033102	Elavl1	91	34.356	MGP_FVBNJ_G0035158	Rbms3	97	34.356
MGP_FVBNJ_G0033102	Elavl1	98	73.585	MGP_FVBNJ_G0028357	Elavl4	89	73.585
MGP_FVBNJ_G0033102	Elavl1	51	34.177	MGP_FVBNJ_G0035499	Rbmx	85	34.177
MGP_FVBNJ_G0033102	Elavl1	83	45.679	MGP_FVBNJ_G0025935	Celf1	61	45.679
MGP_FVBNJ_G0033102	Elavl1	95	40.278	MGP_FVBNJ_G0021609	Pabpc1	54	40.278
MGP_FVBNJ_G0033102	Elavl1	95	32.298	MGP_FVBNJ_G0030747	Tia1	99	31.579
MGP_FVBNJ_G0033102	Elavl1	75	33.333	MGP_FVBNJ_G0017321	Cirbp	82	33.333
MGP_FVBNJ_G0033102	Elavl1	81	43.210	MGP_FVBNJ_G0025138	Celf2	64	43.210
MGP_FVBNJ_G0033102	Elavl1	79	41.975	MGP_FVBNJ_G0017395	Celf5	59	41.975
MGP_FVBNJ_G0033102	Elavl1	97	44.444	MGP_FVBNJ_G0034657	Celf6	57	44.444
MGP_FVBNJ_G0033102	Elavl1	72	32.000	MGP_FVBNJ_G0016682	Rbm8a2	61	32.000
MGP_FVBNJ_G0033102	Elavl1	59	31.481	MGP_FVBNJ_G0028906	Tardbp	72	38.806
MGP_FVBNJ_G0033102	Elavl1	95	44.444	MGP_FVBNJ_G0027344	Celf3	98	35.632
MGP_FVBNJ_G0033102	Elavl1	95	43.210	MGP_FVBNJ_G0024008	Celf4	73	36.232
MGP_FVBNJ_G0033102	Elavl1	94	76.375	MGP_FVBNJ_G0028225	Elavl2	89	76.375