EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0033317 (Gene tree)
Gene ID: -
Gene Symbol: Cnot7
Alias: AU022737|CAF-1|Caf1|Pop2
Full Name: CCR4-NOT transcription complex%2C subunit 7
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 23278 bases
Position: chr8:37226514-37249791
Accession: 1298230
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0088227	CAF1	PF04857.20	3.4e-22	1	2
MGP_FVBNJ_P0088227	CAF1	PF04857.20	3.4e-22	2	2
MGP_FVBNJ_P0088228	CAF1	PF04857.20	3.4e-22	1	2
MGP_FVBNJ_P0088228	CAF1	PF04857.20	3.4e-22	2	2
MGP_FVBNJ_P0088231	CAF1	PF04857.20	3.4e-22	1	2
MGP_FVBNJ_P0088231	CAF1	PF04857.20	3.4e-22	2	2
MGP_FVBNJ_P0088230	CAF1	PF04857.20	6.1e-19	1	2
MGP_FVBNJ_P0088230	CAF1	PF04857.20	6.1e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0088228	-	2542	-	MGP_FVBNJ_P0088228	285 (aa)	-	-
MGP_FVBNJ_T0088229	-	3813	-	-	- (aa)	-	-
MGP_FVBNJ_T0088226	-	2062	XM_006509306	MGP_FVBNJ_P0088226	179 (aa)	XP_006509369	Q60809
MGP_FVBNJ_T0088227	-	2616	-	MGP_FVBNJ_P0088227	285 (aa)	-	-
MGP_FVBNJ_T0088233	-	840	-	-	- (aa)	-	-
MGP_FVBNJ_T0088232	-	679	-	-	- (aa)	-	-
MGP_FVBNJ_T0088231	-	2981	-	MGP_FVBNJ_P0088231	285 (aa)	-	-
MGP_FVBNJ_T0088230	-	2462	-	MGP_FVBNJ_P0088230	248 (aa)	-	-
MGP_FVBNJ_T0088237	-	483	-	-	- (aa)	-	-
MGP_FVBNJ_T0088236	-	726	-	-	- (aa)	-	-
MGP_FVBNJ_T0088235	-	312	-	-	- (aa)	-	-
MGP_FVBNJ_T0088238	-	406	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0033317's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0033317's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0033317	Cnot7	99	76.596	MGP_FVBNJ_G0018169	Cnot8	97	76.596