EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0089441	zf-C2H2	PF00096.26	4.5e-57	1	6
MGP_FVBNJ_P0089441	zf-C2H2	PF00096.26	4.5e-57	2	6
MGP_FVBNJ_P0089441	zf-C2H2	PF00096.26	4.5e-57	3	6
MGP_FVBNJ_P0089441	zf-C2H2	PF00096.26	4.5e-57	4	6
MGP_FVBNJ_P0089441	zf-C2H2	PF00096.26	4.5e-57	5	6
MGP_FVBNJ_P0089441	zf-C2H2	PF00096.26	4.5e-57	6	6
MGP_FVBNJ_P0089440	zf-C2H2	PF00096.26	6.6e-57	1	6
MGP_FVBNJ_P0089440	zf-C2H2	PF00096.26	6.6e-57	2	6
MGP_FVBNJ_P0089440	zf-C2H2	PF00096.26	6.6e-57	3	6
MGP_FVBNJ_P0089440	zf-C2H2	PF00096.26	6.6e-57	4	6
MGP_FVBNJ_P0089440	zf-C2H2	PF00096.26	6.6e-57	5	6
MGP_FVBNJ_P0089440	zf-C2H2	PF00096.26	6.6e-57	6	6
MGP_FVBNJ_P0089442	zf-C2H2	PF00096.26	8.4e-57	1	6
MGP_FVBNJ_P0089442	zf-C2H2	PF00096.26	8.4e-57	2	6
MGP_FVBNJ_P0089442	zf-C2H2	PF00096.26	8.4e-57	3	6
MGP_FVBNJ_P0089442	zf-C2H2	PF00096.26	8.4e-57	4	6
MGP_FVBNJ_P0089442	zf-C2H2	PF00096.26	8.4e-57	5	6
MGP_FVBNJ_P0089442	zf-C2H2	PF00096.26	8.4e-57	6	6
MGP_FVBNJ_P0089443	zf-C2H2	PF00096.26	8.4e-12	1	2
MGP_FVBNJ_P0089443	zf-C2H2	PF00096.26	8.4e-12	2	2
MGP_FVBNJ_P0089441	zf-met	PF12874.7	4.9e-05	1	4
MGP_FVBNJ_P0089441	zf-met	PF12874.7	4.9e-05	2	4
MGP_FVBNJ_P0089441	zf-met	PF12874.7	4.9e-05	3	4
MGP_FVBNJ_P0089441	zf-met	PF12874.7	4.9e-05	4	4
MGP_FVBNJ_P0089440	zf-met	PF12874.7	5.3e-05	1	4
MGP_FVBNJ_P0089440	zf-met	PF12874.7	5.3e-05	2	4
MGP_FVBNJ_P0089440	zf-met	PF12874.7	5.3e-05	3	4
MGP_FVBNJ_P0089440	zf-met	PF12874.7	5.3e-05	4	4
MGP_FVBNJ_P0089442	zf-met	PF12874.7	5.6e-05	1	4
MGP_FVBNJ_P0089442	zf-met	PF12874.7	5.6e-05	2	4
MGP_FVBNJ_P0089442	zf-met	PF12874.7	5.6e-05	3	4
MGP_FVBNJ_P0089442	zf-met	PF12874.7	5.6e-05	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0089446	-	386	-	-	- (aa)	-	-
MGP_FVBNJ_T0089445	-	696	-	-	- (aa)	-	-
MGP_FVBNJ_T0089444	-	371	-	MGP_FVBNJ_P0089444	121 (aa)	-	-
MGP_FVBNJ_T0089443	-	746	-	MGP_FVBNJ_P0089443	244 (aa)	-	-
MGP_FVBNJ_T0089442	-	3885	-	MGP_FVBNJ_P0089442	1294 (aa)	-	-
MGP_FVBNJ_T0089441	-	4757	-	MGP_FVBNJ_P0089441	1271 (aa)	-	-
MGP_FVBNJ_T0089440	-	4806	XM_006531536	MGP_FVBNJ_P0089440	1285 (aa)	XP_006531602	Q80TS5

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0033676	Zfp423	96	36.937	MGP_FVBNJ_G0020511	Zfp759	85	36.937
MGP_FVBNJ_G0033676	Zfp423	96	32.407	MGP_FVBNJ_G0034174	Zfp26	70	32.407
MGP_FVBNJ_G0033676	Zfp423	58	37.895	MGP_FVBNJ_G0026714	Snai1	51	37.500