EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0033900 (Gene tree)
Gene ID: -
Gene Symbol: Zfp1
Alias: Fnp-1|Zfp-1|mkr-1
Full Name: zinc finger protein 1
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 27248 bases
Position: chr8:108039408-108066655
Accession: 99154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0090089	zf-C2H2	PF00096.26	2.1e-51	1	8
MGP_FVBNJ_P0090089	zf-C2H2	PF00096.26	2.1e-51	2	8
MGP_FVBNJ_P0090089	zf-C2H2	PF00096.26	2.1e-51	3	8
MGP_FVBNJ_P0090089	zf-C2H2	PF00096.26	2.1e-51	4	8
MGP_FVBNJ_P0090089	zf-C2H2	PF00096.26	2.1e-51	5	8
MGP_FVBNJ_P0090089	zf-C2H2	PF00096.26	2.1e-51	6	8
MGP_FVBNJ_P0090089	zf-C2H2	PF00096.26	2.1e-51	7	8
MGP_FVBNJ_P0090089	zf-C2H2	PF00096.26	2.1e-51	8	8
MGP_FVBNJ_P0090089	zf-met	PF12874.7	3.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0090089	-	1871	XM_011248348	MGP_FVBNJ_P0090089	403 (aa)	XP_011246650	Q3UI68

Gene Model

Click here to download MGP_FVBNJ_G0033900's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0033900's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0033900	Zfp1	79	40.594	MGP_FVBNJ_G0031630	Zfp574	71	40.594
MGP_FVBNJ_G0033900	Zfp1	60	46.429	MGP_FVBNJ_G0031340	Zfp628	60	46.073
MGP_FVBNJ_G0033900	Zfp1	99	52.489	MGP_FVBNJ_G0023051	Zfp945	99	52.489
MGP_FVBNJ_G0033900	Zfp1	60	43.478	MGP_FVBNJ_G0029613	Gfi1	100	46.457
MGP_FVBNJ_G0033900	Zfp1	98	41.429	MGP_FVBNJ_G0026260	Zfp661	96	41.429
MGP_FVBNJ_G0033900	Zfp1	99	51.029	MGP_FVBNJ_G0034174	Zfp26	89	51.029
MGP_FVBNJ_G0033900	Zfp1	100	42.857	MGP_FVBNJ_G0026691	Zfp334	99	50.427
MGP_FVBNJ_G0033900	Zfp1	80	52.252	MGP_FVBNJ_G0032808	Zfp768	51	52.018
MGP_FVBNJ_G0033900	Zfp1	99	50.000	MGP_FVBNJ_G0023030	Zfp51	95	50.000
MGP_FVBNJ_G0033900	Zfp1	67	46.559	MGP_FVBNJ_G0018176	Zfp672	90	46.559
MGP_FVBNJ_G0033900	Zfp1	99	48.828	MGP_FVBNJ_G0018082	Zfp454	98	48.828
MGP_FVBNJ_G0033900	Zfp1	98	35.468	MGP_FVBNJ_G0032811	E430018J23Rik	86	35.468
MGP_FVBNJ_G0033900	Zfp1	99	45.324	MGP_FVBNJ_G0032810	Zfp747	88	45.324
MGP_FVBNJ_G0033900	Zfp1	64	43.137	MGP_FVBNJ_G0026729	Zfp64	70	43.137
MGP_FVBNJ_G0033900	Zfp1	63	49.485	MGP_FVBNJ_G0029280	Zbtb49	76	48.611
MGP_FVBNJ_G0033900	Zfp1	99	45.076	MGP_FVBNJ_G0023028	Zfp677	99	52.263
MGP_FVBNJ_G0033900	Zfp1	75	40.183	MGP_FVBNJ_G0033745	Zfp319	90	40.183
MGP_FVBNJ_G0033900	Zfp1	98	38.214	MGP_FVBNJ_G0020511	Zfp759	99	38.214
MGP_FVBNJ_G0033900	Zfp1	99	48.548	MGP_FVBNJ_G0020510	Rslcan18	86	48.548
MGP_FVBNJ_G0033900	Zfp1	99	40.144	MGP_FVBNJ_G0018226	Zfp867	95	39.600
MGP_FVBNJ_G0033900	Zfp1	99	42.769	MGP_FVBNJ_G0033529	Zfp882	99	45.349
MGP_FVBNJ_G0033900	Zfp1	86	58.537	MGP_FVBNJ_G0031593	Zfp235	79	58.537
MGP_FVBNJ_G0033900	Zfp1	77	57.042	MGP_FVBNJ_G0030950	Zfp637	91	57.042
MGP_FVBNJ_G0033900	Zfp1	98	50.185	MGP_FVBNJ_G0031600	Zfp94	96	50.185
MGP_FVBNJ_G0033900	Zfp1	67	44.545	MGP_FVBNJ_G0024402	Zfp236	60	44.545
MGP_FVBNJ_G0033900	Zfp1	63	39.716	MGP_FVBNJ_G0030470	Repin1	93	39.716
MGP_FVBNJ_G0033900	Zfp1	98	47.059	MGP_FVBNJ_G0021824	Zfp251	94	47.059
MGP_FVBNJ_G0033900	Zfp1	67	40.167	MGP_FVBNJ_G0030604	Prdm5	67	50.847
MGP_FVBNJ_G0033900	Zfp1	100	51.739	MGP_FVBNJ_G0031595	Zfp111	99	51.739
MGP_FVBNJ_G0033900	Zfp1	79	55.319	MGP_FVBNJ_G0031594	Zfp114	65	55.319
MGP_FVBNJ_G0033900	Zfp1	100	49.309	MGP_FVBNJ_G0031597	Zfp108	99	49.309
MGP_FVBNJ_G0033900	Zfp1	80	57.534	MGP_FVBNJ_G0031592	Zfp112	57	57.534
MGP_FVBNJ_G0033900	Zfp1	78	61.905	MGP_FVBNJ_G0031599	Zfp61	60	61.905
MGP_FVBNJ_G0033900	Zfp1	98	51.440	MGP_FVBNJ_G0031902	Zfp715	95	51.440
MGP_FVBNJ_G0033900	Zfp1	71	56.818	MGP_FVBNJ_G0031900	Zfp141	63	56.818
MGP_FVBNJ_G0033900	Zfp1	67	42.083	MGP_FVBNJ_G0028827	Zbtb17	54	46.512
MGP_FVBNJ_G0033900	Zfp1	78	57.692	MGP_FVBNJ_G0031768	Zfp420	99	57.692
MGP_FVBNJ_G0033900	Zfp1	67	39.791	MGP_FVBNJ_G0031348	Zfp865	80	39.286
MGP_FVBNJ_G0033900	Zfp1	99	52.294	MGP_FVBNJ_G0031891	-	98	52.294
MGP_FVBNJ_G0033900	Zfp1	75	54.749	MGP_FVBNJ_G0020090	Zkscan4	55	54.749
MGP_FVBNJ_G0033900	Zfp1	79	46.460	MGP_FVBNJ_G0023058	Zscan10	83	46.053