EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0034657 (Gene tree)
Gene ID: -
Gene Symbol: Celf6
Alias: 6330569O16Rik|Brunol6
Full Name: CUGBP%2C Elav-like family member 6
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 29781 bases
Position: chr9:56119631-56149411
Accession: 1923433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0092214	RRM_1	PF00076.22	2.1e-51	1	3
MGP_FVBNJ_P0092214	RRM_1	PF00076.22	2.1e-51	2	3
MGP_FVBNJ_P0092214	RRM_1	PF00076.22	2.1e-51	3	3
MGP_FVBNJ_P0092212	RRM_1	PF00076.22	2.6e-51	1	3
MGP_FVBNJ_P0092212	RRM_1	PF00076.22	2.6e-51	2	3
MGP_FVBNJ_P0092212	RRM_1	PF00076.22	2.6e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0092212	-	2969	-	MGP_FVBNJ_P0092212	481 (aa)	-	-
MGP_FVBNJ_T0092213	-	2920	-	MGP_FVBNJ_P0092213	162 (aa)	-	-
MGP_FVBNJ_T0092211	-	3083	XM_006511540	MGP_FVBNJ_P0092211	182 (aa)	XP_006511603	Q7TN33
MGP_FVBNJ_T0092216	-	591	-	-	- (aa)	-	-
MGP_FVBNJ_T0092214	-	2725	-	MGP_FVBNJ_P0092214	460 (aa)	-	-
MGP_FVBNJ_T0092215	-	449	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0034657's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0034657's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0034657	Celf6	51	34.483	MGP_FVBNJ_G0035793	Pabpc5	63	34.483
MGP_FVBNJ_G0034657	Celf6	62	32.955	MGP_FVBNJ_G0030747	Tia1	85	36.000
MGP_FVBNJ_G0034657	Celf6	77	39.062	MGP_FVBNJ_G0022945	Pabpc6	64	39.062
MGP_FVBNJ_G0034657	Celf6	75	85.526	MGP_FVBNJ_G0027344	Celf3	81	87.368
MGP_FVBNJ_G0034657	Celf6	91	45.549	MGP_FVBNJ_G0025935	Celf1	98	45.135
MGP_FVBNJ_G0034657	Celf6	68	38.144	MGP_FVBNJ_G0028517	Pabpc4	50	35.211
MGP_FVBNJ_G0034657	Celf6	95	35.802	MGP_FVBNJ_G0028357	Elavl4	85	40.741
MGP_FVBNJ_G0034657	Celf6	75	84.783	MGP_FVBNJ_G0017395	Celf5	100	66.443
MGP_FVBNJ_G0034657	Celf6	89	37.037	MGP_FVBNJ_G0028225	Elavl2	78	40.741
MGP_FVBNJ_G0034657	Celf6	91	45.567	MGP_FVBNJ_G0025138	Celf2	79	80.952
MGP_FVBNJ_G0034657	Celf6	54	35.802	MGP_FVBNJ_G0017682	Rbms2	50	35.802
MGP_FVBNJ_G0034657	Celf6	66	32.500	MGP_FVBNJ_G0018097	Hnrnpab	65	31.414
MGP_FVBNJ_G0034657	Celf6	52	42.105	MGP_FVBNJ_G0035158	Rbms3	82	42.105
MGP_FVBNJ_G0034657	Celf6	79	31.250	MGP_FVBNJ_G0030504	Hnrnpa2b1	66	32.143
MGP_FVBNJ_G0034657	Celf6	100	67.200	MGP_FVBNJ_G0024008	Celf4	99	67.066
MGP_FVBNJ_G0034657	Celf6	54	31.818	MGP_FVBNJ_G0032858	Tial1	53	32.143
MGP_FVBNJ_G0034657	Celf6	57	44.444	MGP_FVBNJ_G0033102	Elavl1	97	44.444
MGP_FVBNJ_G0034657	Celf6	57	42.308	MGP_FVBNJ_G0034229	Elavl3	80	41.975