EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0034698 (Gene tree)
Gene ID: -
Gene Symbol: Rab11a
Alias: Rab11|Rab11A
Full Name: RAB11A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 26313 bases
Position: chr9:61320417-61346729
Accession: 1858202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0092393	MMR_HSR1	PF01926.23	2.3e-07	1	1
MGP_FVBNJ_P0092394	MMR_HSR1	PF01926.23	2.5e-07	1	1
MGP_FVBNJ_P0092388	MMR_HSR1	PF01926.23	5.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0092388	-	5935	-	MGP_FVBNJ_P0092388	216 (aa)	-	P62492
MGP_FVBNJ_T0092389	-	726	-	MGP_FVBNJ_P0092389	86 (aa)	-	-
MGP_FVBNJ_T0092395	-	695	-	-	- (aa)	-	-
MGP_FVBNJ_T0092394	-	595	-	MGP_FVBNJ_P0092394	155 (aa)	-	-
MGP_FVBNJ_T0092393	-	462	-	MGP_FVBNJ_P0092393	153 (aa)	-	-
MGP_FVBNJ_T0092392	-	397	-	-	- (aa)	-	-
MGP_FVBNJ_T0092391	-	500	-	MGP_FVBNJ_P0092391	86 (aa)	-	-
MGP_FVBNJ_T0092390	-	603	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0034698's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0034698's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0034698	Rab11a	88	49.630	MGP_FVBNJ_G0018989	Rab5c	90	41.262
MGP_FVBNJ_G0034698	Rab11a	68	30.065	MGP_FVBNJ_G0016364	Arl8a	77	30.065
MGP_FVBNJ_G0034698	Rab11a	95	54.110	MGP_FVBNJ_G0025457	Rab14	97	54.422
MGP_FVBNJ_G0034698	Rab11a	100	50.000	MGP_FVBNJ_G0017895	Rab1a	85	52.299
MGP_FVBNJ_G0034698	Rab11a	74	30.303	MGP_FVBNJ_G0019385	Dnajc27	60	30.303
MGP_FVBNJ_G0034698	Rab11a	93	42.254	MGP_FVBNJ_G0023772	Rab31	86	41.071
MGP_FVBNJ_G0034698	Rab11a	88	35.821	MGP_FVBNJ_G0034954	Rab6b	77	35.404
MGP_FVBNJ_G0034698	Rab11a	84	38.281	MGP_FVBNJ_G0032349	Rab6a	84	35.955
MGP_FVBNJ_G0034698	Rab11a	95	70.748	MGP_FVBNJ_G0027195	Rab25	99	62.150
MGP_FVBNJ_G0034698	Rab11a	91	56.115	MGP_FVBNJ_G0021106	Rab2b	95	51.366
MGP_FVBNJ_G0034698	Rab11a	81	34.127	MGP_FVBNJ_G0031251	Kras	87	37.725
MGP_FVBNJ_G0034698	Rab11a	88	31.293	MGP_FVBNJ_G0030152	Rasl11a	60	31.293
MGP_FVBNJ_G0034698	Rab11a	89	43.885	MGP_FVBNJ_G0019195	Rab37	77	45.181
MGP_FVBNJ_G0034698	Rab11a	79	39.669	MGP_FVBNJ_G0031358	Rasl2-9	70	36.364
MGP_FVBNJ_G0034698	Rab11a	97	52.201	MGP_FVBNJ_G0024493	Rab1b	84	55.357
MGP_FVBNJ_G0034698	Rab11a	61	41.935	MGP_FVBNJ_G0030777	Rab7	93	42.857
MGP_FVBNJ_G0034698	Rab11a	91	44.604	MGP_FVBNJ_G0032289	Rab30	97	37.981
MGP_FVBNJ_G0034698	Rab11a	86	34.586	MGP_FVBNJ_G0029129	Rheb	89	32.927
MGP_FVBNJ_G0034698	Rab11a	88	48.148	MGP_FVBNJ_G0023683	Rab5a	91	41.951
MGP_FVBNJ_G0034698	Rab11a	93	48.252	MGP_FVBNJ_G0023927	Rab18	78	47.531
MGP_FVBNJ_G0034698	Rab11a	90	43.066	MGP_FVBNJ_G0026758	Rab22a	81	42.038
MGP_FVBNJ_G0034698	Rab11a	90	40.426	MGP_FVBNJ_G0035444	Rab33a	74	39.665
MGP_FVBNJ_G0034698	Rab11a	81	31.746	MGP_FVBNJ_G0034931	Mras	85	32.768
MGP_FVBNJ_G0034698	Rab11a	81	34.921	MGP_FVBNJ_G0027476	Nras	95	37.931
MGP_FVBNJ_G0034698	Rab11a	90	43.796	MGP_FVBNJ_G0023781	Rab12	70	37.799
MGP_FVBNJ_G0034698	Rab11a	100	96.078	MGP_FVBNJ_G0023335	Rab11b	97	100.000
MGP_FVBNJ_G0034698	Rab11a	94	35.780	MGP_FVBNJ_G0017181	Rab36	79	35.780
MGP_FVBNJ_G0034698	Rab11a	93	41.379	MGP_FVBNJ_G0026992	Rab33b	85	37.799
MGP_FVBNJ_G0034698	Rab11a	91	46.763	MGP_FVBNJ_G0019682	Rab15	93	40.887
MGP_FVBNJ_G0034698	Rab11a	88	49.265	MGP_FVBNJ_G0035613	Rab39b	82	46.857
MGP_FVBNJ_G0034698	Rab11a	75	40.000	MGP_FVBNJ_G0022049	Rabl2	67	37.908
MGP_FVBNJ_G0034698	Rab11a	78	31.746	MGP_FVBNJ_G0019521	Arl4a	60	31.746
MGP_FVBNJ_G0034698	Rab11a	88	48.889	MGP_FVBNJ_G0017710	Rab5b	75	47.205
MGP_FVBNJ_G0034698	Rab11a	81	34.921	MGP_FVBNJ_G0032988	Hras	85	37.654
MGP_FVBNJ_G0034698	Rab11a	91	56.835	MGP_FVBNJ_G0027821	Rab2a	81	54.971
MGP_FVBNJ_G0034698	Rab11a	94	39.423	MGP_FVBNJ_G0036009	Rab9	97	39.423
MGP_FVBNJ_G0034698	Rab11a	89	42.143	MGP_FVBNJ_G0035852	Rab9b	86	41.040
MGP_FVBNJ_G0034698	Rab11a	76	31.667	MGP_FVBNJ_G0019032	Arl4d	58	31.667