EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0034823 (Gene tree)
Gene ID: -
Gene Symbol: Ddx43
Alias: ENSMUSG00000070291|OTTMUSG00000019690
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Plus strand
Length: 27712 bases
Position: chr9:75047726-75075437
Accession: 3642857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0092901	KH_1	PF00013.29	4.5e-12	1	1
MGP_FVBNJ_P0092901	DEAD	PF00270.29	2.6e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0092901	-	2207	-	MGP_FVBNJ_P0092901	646 (aa)	-	D3Z6P9

Gene Model

Click here to download MGP_FVBNJ_G0034823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0034823's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0034823	Ddx43	56	32.240	MGP_FVBNJ_G0022488	Eif4a2	91	31.398
MGP_FVBNJ_G0034823	Ddx43	68	43.527	MGP_FVBNJ_G0021887	Ddx17	67	43.527
MGP_FVBNJ_G0034823	Ddx43	64	36.941	MGP_FVBNJ_G0020413	Ddx41	65	37.232
MGP_FVBNJ_G0034823	Ddx43	57	40.310	MGP_FVBNJ_G0035327	Ddx3x	61	39.259
MGP_FVBNJ_G0034823	Ddx43	54	33.799	MGP_FVBNJ_G0017135	Ddx50	53	33.799
MGP_FVBNJ_G0034823	Ddx43	60	40.000	MGP_FVBNJ_G0020746	Ddx4	56	40.000
MGP_FVBNJ_G0034823	Ddx43	59	35.678	MGP_FVBNJ_G0031183	Ddx47	91	34.218
MGP_FVBNJ_G0034823	Ddx43	60	34.913	MGP_FVBNJ_G0033461	Ddx49	93	34.897
MGP_FVBNJ_G0034823	Ddx43	63	40.757	MGP_FVBNJ_G0022113	Ddx23	54	40.757
MGP_FVBNJ_G0034823	Ddx43	68	44.519	MGP_FVBNJ_G0019136	Ddx5	89	45.040
MGP_FVBNJ_G0034823	Ddx43	53	32.044	MGP_FVBNJ_G0029869	Ddx55	58	32.044
MGP_FVBNJ_G0034823	Ddx43	74	36.270	MGP_FVBNJ_G0019121	Ddx42	50	36.270
MGP_FVBNJ_G0034823	Ddx43	63	34.135	MGP_FVBNJ_G0018685	Ddx52	69	34.135
MGP_FVBNJ_G0034823	Ddx43	62	33.580	MGP_FVBNJ_G0016388	Ddx59	64	33.333
MGP_FVBNJ_G0034823	Ddx43	60	39.012	MGP_FVBNJ_G0016758	D1Pas1	61	39.012
MGP_FVBNJ_G0034823	Ddx43	54	30.159	MGP_FVBNJ_G0033833	Ddx28	70	30.423