EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_FVBNJ_G0035297 (Gene tree)
Gene ID: -
Gene Symbol: Rbm3
Alias: 2600016C11Rik
Full Name: RNA binding motif protein 3
Gene Type: protein_coding
Species: Mus_musculus_fvbnj
Status: putative
Strand: Minus strand
Length: 7245 bases
Position: chrX:2712502-2719746
Accession: 1099460
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_FVBNJ_P0095139	RRM_1	PF00076.22	1.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_FVBNJ_T0095143	-	721	-	-	- (aa)	-	-
MGP_FVBNJ_T0095142	-	1208	-	-	- (aa)	-	-
MGP_FVBNJ_T0095141	-	1055	-	MGP_FVBNJ_P0095141	90 (aa)	-	-
MGP_FVBNJ_T0095140	-	682	-	MGP_FVBNJ_P0095140	154 (aa)	-	-
MGP_FVBNJ_T0095138	-	2234	-	-	- (aa)	-	-
MGP_FVBNJ_T0095139	-	969	-	MGP_FVBNJ_P0095139	153 (aa)	-	-

Gene Model

Click here to download MGP_FVBNJ_G0035297's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0035297's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_FVBNJ_G0035297	Rbm3	80	46.053	MGP_FVBNJ_G0020438	Hnrnpa0	58	43.750
MGP_FVBNJ_G0035297	Rbm3	90	35.385	MGP_FVBNJ_G0026984	Pabpc4l	83	34.286
MGP_FVBNJ_G0035297	Rbm3	87	39.062	MGP_FVBNJ_G0028517	Pabpc4	90	37.500
MGP_FVBNJ_G0035297	Rbm3	82	38.710	MGP_FVBNJ_G0028225	Elavl2	63	32.911
MGP_FVBNJ_G0035297	Rbm3	82	43.243	MGP_FVBNJ_G0018747	Msi2	61	42.857
MGP_FVBNJ_G0035297	Rbm3	80	36.709	MGP_FVBNJ_G0029552	Hnrnpd	70	34.667
MGP_FVBNJ_G0035297	Rbm3	73	33.333	MGP_FVBNJ_G0029866	Snrnp35	55	34.848
MGP_FVBNJ_G0035297	Rbm3	82	38.710	MGP_FVBNJ_G0028357	Elavl4	58	31.646
MGP_FVBNJ_G0035297	Rbm3	78	55.714	MGP_FVBNJ_G0035499	Rbmx	79	56.790
MGP_FVBNJ_G0035297	Rbm3	100	63.529	MGP_FVBNJ_G0017321	Cirbp	99	60.588
MGP_FVBNJ_G0035297	Rbm3	99	35.955	MGP_FVBNJ_G0030747	Tia1	70	41.333
MGP_FVBNJ_G0035297	Rbm3	90	39.326	MGP_FVBNJ_G0017327	Dazap1	78	46.032