EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_FVBNJ_G0035523 (Gene tree)
Gene ID
-
Gene Symbol
Fmr1
Alias
FMRP|Fmr-1
Full Name
fragile X mental retardation syndrome 1
Gene Type
protein_coding
Species
Mus_musculus_fvbnj
Status
putative
Strand
Plus strand
Length
40982 bases
Position
chrX:63464476-63505457
Accession
95564
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_FVBNJ_P0095789KH_1PF00013.291e-1512
MGP_FVBNJ_P0095789KH_1PF00013.291e-1522
MGP_FVBNJ_P0095786KH_1PF00013.291.1e-1512
MGP_FVBNJ_P0095786KH_1PF00013.291.1e-1522
MGP_FVBNJ_P0095780KH_1PF00013.291.2e-1512
MGP_FVBNJ_P0095780KH_1PF00013.291.2e-1522
MGP_FVBNJ_P0095787KH_1PF00013.291.5e-1512
MGP_FVBNJ_P0095787KH_1PF00013.291.5e-1522
MGP_FVBNJ_P0095788KH_1PF00013.291.6e-1512
MGP_FVBNJ_P0095788KH_1PF00013.291.6e-1522
MGP_FVBNJ_P0095785KH_1PF00013.294.6e-1111
MGP_FVBNJ_P0095787AgenetPF05641.122.5e-1111
MGP_FVBNJ_P0095789AgenetPF05641.122.7e-1111
MGP_FVBNJ_P0095788AgenetPF05641.122.7e-1111
MGP_FVBNJ_P0095780AgenetPF05641.123e-1111
MGP_FVBNJ_P0095785AgenetPF05641.123.7e-1111
MGP_FVBNJ_P0095786AgenetPF05641.123.8e-1111
MGP_FVBNJ_P0095785FXMRP1_C_corePF12235.83.1e-4611
MGP_FVBNJ_P0095788FXMRP1_C_corePF12235.83.2e-4611
MGP_FVBNJ_P0095780FXMRP1_C_corePF12235.83.4e-4611
MGP_FVBNJ_P0095786FXMRP1_C_corePF12235.83.4e-4611
MGP_FVBNJ_P0095787FXMRP1_C_corePF12235.82.6e-3111
MGP_FVBNJ_P0095789FXMRP1_C_corePF12235.83e-3111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_FVBNJ_T0095781-1332--- (aa)--
MGP_FVBNJ_T0095780-4409XM_006527810MGP_FVBNJ_P0095780614 (aa)XP_006527873D3Z6U8
MGP_FVBNJ_T0095783-2022--- (aa)--
MGP_FVBNJ_T0095782-2870--- (aa)--
MGP_FVBNJ_T0095785-4257-MGP_FVBNJ_P0095785591 (aa)--
MGP_FVBNJ_T0095784-720--- (aa)--
MGP_FVBNJ_T0095787-4061-MGP_FVBNJ_P0095787585 (aa)--
MGP_FVBNJ_T0095786-4199-MGP_FVBNJ_P0095786631 (aa)--
MGP_FVBNJ_T0095789-4058-MGP_FVBNJ_P0095789589 (aa)--
MGP_FVBNJ_T0095788-4076-MGP_FVBNJ_P0095788593 (aa)--
MGP_FVBNJ_T0095792-646--- (aa)--
MGP_FVBNJ_T0095790-1950--- (aa)--
MGP_FVBNJ_T0095791-588--- (aa)--
Gene Model
Click here to download MGP_FVBNJ_G0035523's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_FVBNJ_G0035523's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_FVBNJ_G0035523Fmr18565.613MGP_FVBNJ_G0026942Fxr18173.653
MGP_FVBNJ_G0035523Fmr18259.759MGP_FVBNJ_G0018367Fxr26771.601

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