EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0015816 (Gene tree)
Gene ID: -
Gene Symbol: Rab23
Alias: AW545388|opb|opb2
Full Name: RAB23%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 25643 bases
Position: chr1:32425863-32451505
Accession: 99833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0019106	MMR_HSR1	PF01926.23	1.2e-05	1	1
MGP_LPJ_P0019110	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0019109	-	1087	-	-	- (aa)	-	-
MGP_LPJ_T0019108	-	2047	-	-	- (aa)	-	-
MGP_LPJ_T0019112	-	437	-	-	- (aa)	-	-
MGP_LPJ_T0019113	-	1764	-	-	- (aa)	-	-
MGP_LPJ_T0019110	-	4218	-	MGP_LPJ_P0019110	237 (aa)	-	-
MGP_LPJ_T0019111	-	1966	-	-	- (aa)	-	-
MGP_LPJ_T0019105	-	2557	-	-	- (aa)	-	-
MGP_LPJ_T0019104	-	444	-	-	- (aa)	-	-
MGP_LPJ_T0019107	-	4398	-	MGP_LPJ_P0019107	64 (aa)	-	-
MGP_LPJ_T0019106	-	4322	-	MGP_LPJ_P0019106	237 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0015816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0015816's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0015816	Rab23	66	39.873	MGP_LPJ_G0032482	Rab6a	76	39.873
MGP_LPJ_G0015816	Rab23	61	31.507	MGP_LPJ_G0033130	Hras	98	30.332
MGP_LPJ_G0015816	Rab23	80	30.890	MGP_LPJ_G0023888	Rab31	93	30.890
MGP_LPJ_G0015816	Rab23	70	34.337	MGP_LPJ_G0017974	Rab1a	81	34.337
MGP_LPJ_G0015816	Rab23	77	31.383	MGP_LPJ_G0035583	Rab33a	79	31.383
MGP_LPJ_G0015816	Rab23	72	34.682	MGP_LPJ_G0019767	Rab15	81	34.682
MGP_LPJ_G0015816	Rab23	65	31.410	MGP_LPJ_G0031384	Kras	94	32.778
MGP_LPJ_G0015816	Rab23	66	41.139	MGP_LPJ_G0035082	Rab6b	76	41.139
MGP_LPJ_G0015816	Rab23	67	35.152	MGP_LPJ_G0027136	Rab33b	72	35.152
MGP_LPJ_G0015816	Rab23	69	35.119	MGP_LPJ_G0023897	Rab12	57	35.119
MGP_LPJ_G0015816	Rab23	65	36.538	MGP_LPJ_G0035754	Rab39b	73	36.538
MGP_LPJ_G0015816	Rab23	70	34.337	MGP_LPJ_G0024612	Rab1b	83	34.337
MGP_LPJ_G0015816	Rab23	70	34.337	MGP_LPJ_G0025581	Rab14	88	35.338
MGP_LPJ_G0015816	Rab23	77	38.172	MGP_LPJ_G0017261	Rab36	69	38.172
MGP_LPJ_G0015816	Rab23	74	35.227	MGP_LPJ_G0019068	Rab5c	81	35.227
MGP_LPJ_G0015816	Rab23	75	32.086	MGP_LPJ_G0029531	Rasl11b	74	32.086
MGP_LPJ_G0015816	Rab23	85	31.683	MGP_LPJ_G0027336	Rab25	92	31.683
MGP_LPJ_G0015816	Rab23	67	38.125	MGP_LPJ_G0023797	Rab5a	74	38.125
MGP_LPJ_G0015816	Rab23	80	32.984	MGP_LPJ_G0034839	Rab11a	92	34.752
MGP_LPJ_G0015816	Rab23	66	37.654	MGP_LPJ_G0036012	Rab9b	80	37.654
MGP_LPJ_G0015816	Rab23	72	35.465	MGP_LPJ_G0024045	Rab18	83	35.465
MGP_LPJ_G0015816	Rab23	70	33.918	MGP_LPJ_G0030901	Rab7	94	43.478
MGP_LPJ_G0015816	Rab23	65	33.766	MGP_LPJ_G0026893	Rab22a	79	33.766
MGP_LPJ_G0015816	Rab23	64	38.462	MGP_LPJ_G0018671	Rab34	60	38.462
MGP_LPJ_G0015816	Rab23	86	32.850	MGP_LPJ_G0021198	Rab2b	94	32.850
MGP_LPJ_G0015816	Rab23	75	32.961	MGP_LPJ_G0019273	Rab37	81	32.961
MGP_LPJ_G0015816	Rab23	65	34.375	MGP_LPJ_G0036162	Rab9	79	34.375
MGP_LPJ_G0015816	Rab23	75	34.831	MGP_LPJ_G0029876	Rab35	95	33.684
MGP_LPJ_G0015816	Rab23	80	33.508	MGP_LPJ_G0023444	Rab11b	88	33.508
MGP_LPJ_G0015816	Rab23	68	33.129	MGP_LPJ_G0031491	Rasl2-9	74	33.129
MGP_LPJ_G0015816	Rab23	74	37.500	MGP_LPJ_G0032422	Rab30	87	37.500
MGP_LPJ_G0015816	Rab23	83	32.487	MGP_LPJ_G0027965	Rab2a	95	31.863
MGP_LPJ_G0015816	Rab23	65	36.129	MGP_LPJ_G0029255	Rheb	84	36.129
MGP_LPJ_G0015816	Rab23	61	32.192	MGP_LPJ_G0027615	Nras	95	35.862
MGP_LPJ_G0015816	Rab23	67	31.765	MGP_LPJ_G0030285	Rasl11a	69	31.765