EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0015957 (Gene tree)
Gene ID: -
Gene Symbol: Spats2l
Alias: 2810022L02Rik|A230104H11Rik|AA987173|AI480531|AI842453|AW413586
Full Name: spermatogenesis associated%2C serine-rich 2-like
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 173219 bases
Position: chr1:58497918-58671136
Accession: 1914448
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0019842	DUF1387	PF07139.11	2.6e-128	1	1
MGP_LPJ_P0019838	DUF1387	PF07139.11	1.8e-75	1	2
MGP_LPJ_P0019838	DUF1387	PF07139.11	1.8e-75	2	2
MGP_LPJ_P0019835	DUF1387	PF07139.11	3e-28	1	1
MGP_LPJ_P0019837	DUF1387	PF07139.11	3.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0019842	-	1947	-	MGP_LPJ_P0019842	648 (aa)	-	-
MGP_LPJ_T0019843	-	325	-	-	- (aa)	-	-
MGP_LPJ_T0019840	-	417	-	-	- (aa)	-	-
MGP_LPJ_T0019833	-	823	XM_006496210	MGP_LPJ_P0019833	108 (aa)	XP_006496273	Q91WJ7
MGP_LPJ_T0019835	-	1021	-	MGP_LPJ_P0019835	244 (aa)	-	-
MGP_LPJ_T0019834	-	655	-	-	- (aa)	-	-
MGP_LPJ_T0019837	-	691	-	MGP_LPJ_P0019837	130 (aa)	-	-
MGP_LPJ_T0019836	-	1207	-	-	- (aa)	-	-
MGP_LPJ_T0019839	-	2348	-	-	- (aa)	-	-
MGP_LPJ_T0019838	-	965	-	MGP_LPJ_P0019838	270 (aa)	-	-
MGP_LPJ_T0019841	-	384	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0015957's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0015957's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0015957	Spats2l	85	50.450	MGP_LPJ_G0022223	Spats2	68	48.698