EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0016258 (Gene tree)
Gene ID: -
Gene Symbol: Hdlbp
Alias: 1110005P14Rik|AA960365|AI118566|D1Ertd101e
Full Name: high density lipoprotein (HDL) binding protein
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 75619 bases
Position: chr1:96208212-96283830
Accession: 99256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0021379	KH_1	PF00013.29	5.3e-188	1	14
MGP_LPJ_P0021379	KH_1	PF00013.29	5.3e-188	2	14
MGP_LPJ_P0021379	KH_1	PF00013.29	5.3e-188	3	14
MGP_LPJ_P0021379	KH_1	PF00013.29	5.3e-188	4	14
MGP_LPJ_P0021379	KH_1	PF00013.29	5.3e-188	5	14
MGP_LPJ_P0021379	KH_1	PF00013.29	5.3e-188	6	14
MGP_LPJ_P0021379	KH_1	PF00013.29	5.3e-188	7	14
MGP_LPJ_P0021379	KH_1	PF00013.29	5.3e-188	8	14
MGP_LPJ_P0021379	KH_1	PF00013.29	5.3e-188	9	14
MGP_LPJ_P0021379	KH_1	PF00013.29	5.3e-188	10	14
MGP_LPJ_P0021379	KH_1	PF00013.29	5.3e-188	11	14
MGP_LPJ_P0021379	KH_1	PF00013.29	5.3e-188	12	14
MGP_LPJ_P0021379	KH_1	PF00013.29	5.3e-188	13	14
MGP_LPJ_P0021379	KH_1	PF00013.29	5.3e-188	14	14
MGP_LPJ_P0021380	KH_1	PF00013.29	5.3e-188	1	14
MGP_LPJ_P0021380	KH_1	PF00013.29	5.3e-188	2	14
MGP_LPJ_P0021380	KH_1	PF00013.29	5.3e-188	3	14
MGP_LPJ_P0021380	KH_1	PF00013.29	5.3e-188	4	14
MGP_LPJ_P0021380	KH_1	PF00013.29	5.3e-188	5	14
MGP_LPJ_P0021380	KH_1	PF00013.29	5.3e-188	6	14
MGP_LPJ_P0021380	KH_1	PF00013.29	5.3e-188	7	14
MGP_LPJ_P0021380	KH_1	PF00013.29	5.3e-188	8	14
MGP_LPJ_P0021380	KH_1	PF00013.29	5.3e-188	9	14
MGP_LPJ_P0021380	KH_1	PF00013.29	5.3e-188	10	14
MGP_LPJ_P0021380	KH_1	PF00013.29	5.3e-188	11	14
MGP_LPJ_P0021380	KH_1	PF00013.29	5.3e-188	12	14
MGP_LPJ_P0021380	KH_1	PF00013.29	5.3e-188	13	14
MGP_LPJ_P0021380	KH_1	PF00013.29	5.3e-188	14	14
MGP_LPJ_P0021381	KH_1	PF00013.29	1.1e-176	1	13
MGP_LPJ_P0021381	KH_1	PF00013.29	1.1e-176	2	13
MGP_LPJ_P0021381	KH_1	PF00013.29	1.1e-176	3	13
MGP_LPJ_P0021381	KH_1	PF00013.29	1.1e-176	4	13
MGP_LPJ_P0021381	KH_1	PF00013.29	1.1e-176	5	13
MGP_LPJ_P0021381	KH_1	PF00013.29	1.1e-176	6	13
MGP_LPJ_P0021381	KH_1	PF00013.29	1.1e-176	7	13
MGP_LPJ_P0021381	KH_1	PF00013.29	1.1e-176	8	13
MGP_LPJ_P0021381	KH_1	PF00013.29	1.1e-176	9	13
MGP_LPJ_P0021381	KH_1	PF00013.29	1.1e-176	10	13
MGP_LPJ_P0021381	KH_1	PF00013.29	1.1e-176	11	13
MGP_LPJ_P0021381	KH_1	PF00013.29	1.1e-176	12	13
MGP_LPJ_P0021381	KH_1	PF00013.29	1.1e-176	13	13
MGP_LPJ_P0021384	KH_1	PF00013.29	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0021384	-	740	-	MGP_LPJ_P0021384	178 (aa)	-	-
MGP_LPJ_T0021388	-	341	-	MGP_LPJ_P0021388	22 (aa)	-	-
MGP_LPJ_T0021389	-	3209	-	-	- (aa)	-	-
MGP_LPJ_T0021380	-	4427	-	MGP_LPJ_P0021380	1268 (aa)	-	-
MGP_LPJ_T0021381	-	3808	-	MGP_LPJ_P0021381	1199 (aa)	-	-
MGP_LPJ_T0021382	-	2172	-	-	- (aa)	-	-
MGP_LPJ_T0021383	-	528	-	MGP_LPJ_P0021383	22 (aa)	-	-
MGP_LPJ_T0021379	-	6231	XM_006529074	MGP_LPJ_P0021379	1268 (aa)	XP_006529137	Q8VDJ3
MGP_LPJ_T0021385	-	671	-	MGP_LPJ_P0021385	141 (aa)	-	-
MGP_LPJ_T0021386	-	850	-	MGP_LPJ_P0021386	129 (aa)	-	-
MGP_LPJ_T0021387	-	630	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0016258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0016258's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0016258	Hdlbp	94	50.276	MGP_LPJ_G0035950	Gm382	95	50.276
MGP_LPJ_G0016258	Hdlbp	91	46.008	MGP_LPJ_G0035951	4921511C20Rik	100	46.008