EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0016259 (Gene tree)
Gene ID: -
Gene Symbol: Sept2
Alias: AW208991|Nedd-5|Nedd5|mKIAA0158
Full Name: septin 2
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 31658 bases
Position: chr1:96284005-96315662
Accession: 97298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0021391	MMR_HSR1	PF01926.23	9.6e-08	1	1
MGP_LPJ_P0021396	MMR_HSR1	PF01926.23	9.7e-08	1	1
MGP_LPJ_P0021397	MMR_HSR1	PF01926.23	1e-07	1	1
MGP_LPJ_P0021400	MMR_HSR1	PF01926.23	1e-07	1	1
MGP_LPJ_P0021390	MMR_HSR1	PF01926.23	1.3e-07	1	1
MGP_LPJ_P0021394	MMR_HSR1	PF01926.23	1.4e-07	1	1
MGP_LPJ_P0021398	MMR_HSR1	PF01926.23	1.4e-07	1	1
MGP_LPJ_P0021399	MMR_HSR1	PF01926.23	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0021400	-	779	-	MGP_LPJ_P0021400	221 (aa)	-	-
MGP_LPJ_T0021402	-	418	-	MGP_LPJ_P0021402	44 (aa)	-	-
MGP_LPJ_T0021399	-	552	-	MGP_LPJ_P0021399	177 (aa)	-	-
MGP_LPJ_T0021398	-	477	-	MGP_LPJ_P0021398	120 (aa)	-	-
MGP_LPJ_T0021401	-	466	-	-	- (aa)	-	-
MGP_LPJ_T0021393	-	424	-	MGP_LPJ_P0021393	77 (aa)	-	-
MGP_LPJ_T0021392	-	696	-	-	- (aa)	-	-
MGP_LPJ_T0021391	-	730	-	MGP_LPJ_P0021391	212 (aa)	-	-
MGP_LPJ_T0021390	-	512	XM_006529240	MGP_LPJ_P0021390	107 (aa)	XP_006529303	P42208
MGP_LPJ_T0021397	-	756	-	MGP_LPJ_P0021397	221 (aa)	-	-
MGP_LPJ_T0021396	-	784	-	MGP_LPJ_P0021396	213 (aa)	-	-
MGP_LPJ_T0021395	-	3314	-	-	- (aa)	-	-
MGP_LPJ_T0021394	-	2003	-	MGP_LPJ_P0021394	361 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0016259's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0016259's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0016259	Sept2	100	64.486	MGP_LPJ_G0022517	Sept5	92	60.059
MGP_LPJ_G0016259	Sept2	100	65.421	MGP_LPJ_G0018809	Sept4	93	68.837
MGP_LPJ_G0016259	Sept2	100	41.228	MGP_LPJ_G0017166	Sept10	67	43.144
MGP_LPJ_G0016259	Sept2	100	50.000	MGP_LPJ_G0022039	Sept3	89	49.007
MGP_LPJ_G0016259	Sept2	100	42.202	MGP_LPJ_G0029659	Sept11	69	43.234
MGP_LPJ_G0016259	Sept2	100	60.748	MGP_LPJ_G0032943	Sept1	100	64.828
MGP_LPJ_G0016259	Sept2	100	48.148	MGP_LPJ_G0022381	Sept12	81	43.077
MGP_LPJ_G0016259	Sept2	100	41.284	MGP_LPJ_G0035518	Sept6	72	43.234
MGP_LPJ_G0016259	Sept2	100	49.778	MGP_LPJ_G0019348	Sept9	88	49.767
MGP_LPJ_G0016259	Sept2	100	62.037	MGP_LPJ_G0034395	Sept7	65	62.887
MGP_LPJ_G0016259	Sept2	100	41.818	MGP_LPJ_G0018208	Sept8	70	42.812