EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0016407 (Gene tree)
Gene ID: -
Gene Symbol: Snrpe
Alias: AL022645|C76690|SME
Full Name: small nuclear ribonucleoprotein E
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 7371 bases
Position: chr1:138481600-138488970
Accession: 98346
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0022071	LSM	PF01423.22	2.1e-17	1	1
MGP_LPJ_P0022072	LSM	PF01423.22	8.9e-12	1	1
MGP_LPJ_P0022073	LSM	PF01423.22	4.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0022074	-	597	-	MGP_LPJ_P0022074	69 (aa)	-	-
MGP_LPJ_T0022073	-	75	-	MGP_LPJ_P0022073	25 (aa)	-	-
MGP_LPJ_T0022072	-	669	-	MGP_LPJ_P0022072	91 (aa)	-	-
MGP_LPJ_T0022071	-	279	-	MGP_LPJ_P0022071	92 (aa)	-	-
MGP_LPJ_T0022070	-	653	-	MGP_LPJ_P0022070	69 (aa)	-	P62305

Gene Model

Click here to download MGP_LPJ_G0016407's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0016407's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0016407	Snrpe	77	32.877	MGP_LPJ_G0030682	Lsm5	76	32.877