EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0016471 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb41
Alias: 8430415N23Rik|9430031N01|9830132G07Rik|AI316857
Full Name: zinc finger and BTB domain containing 41
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 26894 bases
Position: chr1:144589851-144616744
Accession: 2444487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0022377	zf-C2H2	PF00096.26	5.9e-36	1	6
MGP_LPJ_P0022377	zf-C2H2	PF00096.26	5.9e-36	2	6
MGP_LPJ_P0022377	zf-C2H2	PF00096.26	5.9e-36	3	6
MGP_LPJ_P0022377	zf-C2H2	PF00096.26	5.9e-36	4	6
MGP_LPJ_P0022377	zf-C2H2	PF00096.26	5.9e-36	5	6
MGP_LPJ_P0022377	zf-C2H2	PF00096.26	5.9e-36	6	6
MGP_LPJ_P0022377	zf-met	PF12874.7	0.00043	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0022378	-	2868	-	MGP_LPJ_P0022378	908 (aa)	-	-
MGP_LPJ_T0022379	-	3803	-	MGP_LPJ_P0022379	218 (aa)	-	-
MGP_LPJ_T0022377	-	2127	XM_006529446	MGP_LPJ_P0022377	657 (aa)	XP_006529509	Q811F1

Gene Model

Click here to download MGP_LPJ_G0016471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0016471's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0016471	Zbtb41	54	34.286	MGP_LPJ_G0026547	Gzf1	84	34.286
MGP_LPJ_G0016471	Zbtb41	71	41.279	MGP_LPJ_G0029407	Zbtb49	62	47.887
MGP_LPJ_G0016471	Zbtb41	58	41.844	MGP_LPJ_G0031076	Zfp637	72	41.844
MGP_LPJ_G0016471	Zbtb41	68	33.333	MGP_LPJ_G0023139	Zfp677	80	37.017
MGP_LPJ_G0016471	Zbtb41	61	38.824	MGP_LPJ_G0024520	Zfp236	66	38.824
MGP_LPJ_G0016471	Zbtb41	58	33.910	MGP_LPJ_G0033673	Zfp882	76	33.910
MGP_LPJ_G0016471	Zbtb41	61	37.379	MGP_LPJ_G0031726	Zfp94	82	37.379
MGP_LPJ_G0016471	Zbtb41	76	34.274	MGP_LPJ_G0017088	Zbtb24	72	34.274
MGP_LPJ_G0016471	Zbtb41	64	39.326	MGP_LPJ_G0027059	Mynn	61	39.326
MGP_LPJ_G0016471	Zbtb41	59	36.939	MGP_LPJ_G0032013	2610021A01Rik	56	37.377
MGP_LPJ_G0016471	Zbtb41	89	36.879	MGP_LPJ_G0023906	Zbtb14	97	36.879
MGP_LPJ_G0016471	Zbtb41	54	32.797	MGP_LPJ_G0023165	Zscan10	76	32.797
MGP_LPJ_G0016471	Zbtb41	55	34.167	MGP_LPJ_G0031481	Zfp865	79	41.071
MGP_LPJ_G0016471	Zbtb41	89	30.769	MGP_LPJ_G0020879	Zfp131	70	30.061
MGP_LPJ_G0016471	Zbtb41	63	32.759	MGP_LPJ_G0035338	Zfp651	66	33.071
MGP_LPJ_G0016471	Zbtb41	59	34.007	MGP_LPJ_G0026827	Zfp334	68	41.026