EuRBPDB

Description

Ensembl ID: MGP_LPJ_G0016515 (Gene tree)
Gene ID: -
Gene Symbol: Dhx9
Alias: AI326842|Ddx9|HEL-5|NDH II|NDHII|RHA|RNA helicase|leukophysin|mHEL-5|nuclear DNA helicase II
Full Name: DEAH (Asp-Glu-Ala-His) box polypeptide 9
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 31936 bases
Position: chr1:159404611-159436546
Accession: 108177
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0022598	dsrm	PF00035.26	9.9e-27	1	2
MGP_LPJ_P0022598	dsrm	PF00035.26	9.9e-27	2	2
MGP_LPJ_P0022595	dsrm	PF00035.26	3.6e-26	1	2
MGP_LPJ_P0022595	dsrm	PF00035.26	3.6e-26	2	2
MGP_LPJ_P0022594	dsrm	PF00035.26	3.7e-26	1	2
MGP_LPJ_P0022594	dsrm	PF00035.26	3.7e-26	2	2
MGP_LPJ_P0022598	DEAD	PF00270.29	2.4e-06	1	1
MGP_LPJ_P0022594	DEAD	PF00270.29	7.7e-06	1	1
MGP_LPJ_P0022595	DEAD	PF00270.29	7.7e-06	1	1
MGP_LPJ_P0022594	HA2	PF04408.23	1.2e-14	1	1
MGP_LPJ_P0022595	HA2	PF04408.23	1.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0022600	-	2661	-	-	- (aa)	-	-
MGP_LPJ_T0022601	-	2256	-	-	- (aa)	-	-
MGP_LPJ_T0022602	-	1602	-	-	- (aa)	-	-
MGP_LPJ_T0022594	-	4560	XM_011247918	MGP_LPJ_P0022594	1383 (aa)	XP_011246220	A0A087WPL5
MGP_LPJ_T0022595	-	4615	-	MGP_LPJ_P0022595	1384 (aa)	-	-
MGP_LPJ_T0022596	-	2406	-	MGP_LPJ_P0022596	459 (aa)	-	-
MGP_LPJ_T0022597	-	2018	-	MGP_LPJ_P0022597	46 (aa)	-	-
MGP_LPJ_T0022598	-	2346	-	MGP_LPJ_P0022598	735 (aa)	-	-
MGP_LPJ_T0022599	-	658	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0016515	Dhx9	52	40.153	MGP_LPJ_G0035230	Dhx30	62	32.861
MGP_LPJ_G0016515	Dhx9	54	35.915	MGP_LPJ_G0023969	Dhx57	63	35.681
MGP_LPJ_G0016515	Dhx9	53	38.034	MGP_LPJ_G0027196	Dhx36	76	37.613
MGP_LPJ_G0016515	Dhx9	54	32.518	MGP_LPJ_G0026736	Dhx35	52	31.051
MGP_LPJ_G0016515	Dhx9	56	47.685	MGP_LPJ_G0024319	Ythdc2	90	35.912
MGP_LPJ_G0016515	Dhx9	58	32.593	MGP_LPJ_G0020842	Dhx29	65	31.655