EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0017215 (Gene tree)
Gene ID: -
Gene Symbol: Ddx50
Alias: 4933429B04Rik|8430408E17Rik|GU2|RH-II|RH-II/Gubeta
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 50118 bases
Position: chr10:62442530-62492647
Accession: 2182303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0025381	GUCT	PF08152.12	2.5e-27	1	1
MGP_LPJ_P0025381	ResIII	PF04851.15	5.8e-10	1	1
MGP_LPJ_P0025381	DEAD	PF00270.29	1.9e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0025381	-	2527	XM_006514345	MGP_LPJ_P0025381	734 (aa)	XP_006514408	Q99MJ9

Gene Model

Click here to download MGP_LPJ_G0017215's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0017215's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0017215	Ddx50	54	31.204	MGP_LPJ_G0031317	Ddx47	94	30.175
MGP_LPJ_G0017215	Ddx50	50	33.962	MGP_LPJ_G0021977	Ddx17	55	33.962
MGP_LPJ_G0017215	Ddx50	50	31.720	MGP_LPJ_G0022580	Eif4a2	90	30.904
MGP_LPJ_G0017215	Ddx50	56	34.272	MGP_LPJ_G0026840	Ddx27	52	34.129
MGP_LPJ_G0017215	Ddx50	82	66.446	MGP_LPJ_G0017214	Ddx21	71	64.217
MGP_LPJ_G0017215	Ddx50	50	32.353	MGP_LPJ_G0019380	Eif4a3	86	32.353