EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0026114	RRM_1	PF00076.22	5e-26	1	1
MGP_LPJ_P0026116	RRM_1	PF00076.22	1.2e-25	1	1
MGP_LPJ_P0026115	RRM_1	PF00076.22	1.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0026118	-	912	-	-	- (aa)	-	-
MGP_LPJ_T0026119	-	894	-	-	- (aa)	-	-
MGP_LPJ_T0026114	-	423	XM_006513164	MGP_LPJ_P0026114	108 (aa)	XP_006513227	P60824
MGP_LPJ_T0026115	-	1321	-	MGP_LPJ_P0026115	172 (aa)	-	-
MGP_LPJ_T0026116	-	845	-	MGP_LPJ_P0026116	168 (aa)	-	-
MGP_LPJ_T0026117	-	376	-	-	- (aa)	-	-
MGP_LPJ_T0026120	-	593	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0017398	Cirbp	70	44.737	MGP_LPJ_G0030637	Hnrnpa2b1	50	44.737
MGP_LPJ_G0017398	Cirbp	80	32.558	MGP_LPJ_G0025262	Celf2	82	33.333
MGP_LPJ_G0017398	Cirbp	84	31.868	MGP_LPJ_G0026748	Srsf6	61	31.868
MGP_LPJ_G0017398	Cirbp	85	40.244	MGP_LPJ_G0032999	Tial1	67	40.244
MGP_LPJ_G0017398	Cirbp	87	40.351	MGP_LPJ_G0029870	Msi1	51	38.983
MGP_LPJ_G0017398	Cirbp	84	38.889	MGP_LPJ_G0028490	Elavl4	70	38.889
MGP_LPJ_G0017398	Cirbp	83	37.931	MGP_LPJ_G0029681	Hnrnpd	68	37.931
MGP_LPJ_G0017398	Cirbp	73	36.709	MGP_LPJ_G0029683	Hnrnpdl	54	36.709
MGP_LPJ_G0017398	Cirbp	91	35.714	MGP_LPJ_G0030871	Tia1	80	37.778
MGP_LPJ_G0017398	Cirbp	92	42.105	MGP_LPJ_G0017404	Dazap1	74	47.273
MGP_LPJ_G0017398	Cirbp	79	63.529	MGP_LPJ_G0035637	Rbmx	83	63.529
MGP_LPJ_G0017398	Cirbp	82	33.333	MGP_LPJ_G0033249	Elavl1	75	33.333
MGP_LPJ_G0017398	Cirbp	81	30.682	MGP_LPJ_G0021790	Gm12355	63	30.682
MGP_LPJ_G0017398	Cirbp	79	37.500	MGP_LPJ_G0034372	Elavl3	62	37.500
MGP_LPJ_G0017398	Cirbp	76	37.500	MGP_LPJ_G0028358	Elavl2	64	37.500
MGP_LPJ_G0017398	Cirbp	91	39.759	MGP_LPJ_G0026769	Pabpc1l	53	39.759
MGP_LPJ_G0017398	Cirbp	68	34.247	MGP_LPJ_G0021302	Pspc1	69	41.304
MGP_LPJ_G0017398	Cirbp	99	60.588	MGP_LPJ_G0035427	Rbm3	100	63.529
MGP_LPJ_G0017398	Cirbp	78	40.476	MGP_LPJ_G0026886	Rbm38	74	38.043
MGP_LPJ_G0017398	Cirbp	85	38.043	MGP_LPJ_G0022627	Ncbp2	54	36.471
MGP_LPJ_G0017398	Cirbp	88	43.243	MGP_LPJ_G0018828	Msi2	61	41.429
MGP_LPJ_G0017398	Cirbp	94	38.614	MGP_LPJ_G0020535	Hnrnpa0	56	43.421