EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0017472 (Gene tree)
Gene ID: -
Gene Symbol: Celf5
Alias: 4930565A21Rik|Brunol5
Full Name: CUGBP%2C Elav-like family member 5
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 28947 bases
Position: chr10:82625165-82654111
Accession: 2442333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0026401	RRM_1	PF00076.22	1.5e-50	1	3
MGP_LPJ_P0026401	RRM_1	PF00076.22	1.5e-50	2	3
MGP_LPJ_P0026401	RRM_1	PF00076.22	1.5e-50	3	3
MGP_LPJ_P0026405	RRM_1	PF00076.22	2.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0026404	-	748	-	-	- (aa)	-	-
MGP_LPJ_T0026405	-	442	-	MGP_LPJ_P0026405	92 (aa)	-	-
MGP_LPJ_T0026402	-	605	-	-	- (aa)	-	-
MGP_LPJ_T0026403	-	945	-	-	- (aa)	-	-
MGP_LPJ_T0026401	-	4410	XM_006513743	MGP_LPJ_P0026401	446 (aa)	XP_006513806	D3Z4C5

Gene Model

Click here to download MGP_LPJ_G0017472's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0017472's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0017472	Celf5	93	76.842	MGP_LPJ_G0024123	Celf4	97	65.795
MGP_LPJ_G0017472	Celf5	70	32.812	MGP_LPJ_G0026769	Pabpc1l	60	35.870
MGP_LPJ_G0017472	Celf5	97	30.857	MGP_LPJ_G0028358	Elavl2	97	30.857
MGP_LPJ_G0017472	Celf5	98	38.554	MGP_LPJ_G0024286	Pabpc2	63	38.554
MGP_LPJ_G0017472	Celf5	93	59.770	MGP_LPJ_G0025262	Celf2	92	53.659
MGP_LPJ_G0017472	Celf5	71	39.759	MGP_LPJ_G0021700	Pabpc1	52	39.759
MGP_LPJ_G0017472	Celf5	78	36.250	MGP_LPJ_G0017761	Rbms2	77	36.250
MGP_LPJ_G0017472	Celf5	66	34.426	MGP_LPJ_G0035943	Pabpc5	70	35.955
MGP_LPJ_G0017472	Celf5	57	42.105	MGP_LPJ_G0035290	Rbms3	93	36.134
MGP_LPJ_G0017472	Celf5	89	32.184	MGP_LPJ_G0030871	Tia1	88	34.568
MGP_LPJ_G0017472	Celf5	89	30.120	MGP_LPJ_G0028490	Elavl4	74	37.500
MGP_LPJ_G0017472	Celf5	59	41.975	MGP_LPJ_G0033249	Elavl1	79	41.975
MGP_LPJ_G0017472	Celf5	93	56.322	MGP_LPJ_G0026076	Celf1	98	44.650
MGP_LPJ_G0017472	Celf5	93	76.744	MGP_LPJ_G0027482	Celf3	100	66.848
MGP_LPJ_G0017472	Celf5	57	32.407	MGP_LPJ_G0021876	Puf60	81	32.407
MGP_LPJ_G0017472	Celf5	93	80.645	MGP_LPJ_G0034798	Celf6	75	84.783
MGP_LPJ_G0017472	Celf5	91	31.765	MGP_LPJ_G0034372	Elavl3	77	38.272