EuRBPDB

Description

Ensembl ID: MGP_LPJ_G0017864 (Gene tree)
Gene ID: -
Gene Symbol: Patz1
Alias: 8430401L15Rik|AI447519|MAZR|Mazr|POZ-AT hook-zinc finger protein|Patz|Zfp278|Zfp278GN|mazr
Full Name: POZ (BTB) and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Plus strand
Length: 20328 bases
Position: chr11:244606-264933
Accession: 1891832
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0027590	zf-C2H2	PF00096.26	3.9e-26	1	5
MGP_LPJ_P0027590	zf-C2H2	PF00096.26	3.9e-26	2	5
MGP_LPJ_P0027590	zf-C2H2	PF00096.26	3.9e-26	3	5
MGP_LPJ_P0027590	zf-C2H2	PF00096.26	3.9e-26	4	5
MGP_LPJ_P0027590	zf-C2H2	PF00096.26	3.9e-26	5	5
MGP_LPJ_P0027593	zf-C2H2	PF00096.26	5e-20	1	4
MGP_LPJ_P0027593	zf-C2H2	PF00096.26	5e-20	2	4
MGP_LPJ_P0027593	zf-C2H2	PF00096.26	5e-20	3	4
MGP_LPJ_P0027593	zf-C2H2	PF00096.26	5e-20	4	4
MGP_LPJ_P0027592	zf-C2H2	PF00096.26	2.2e-15	1	3
MGP_LPJ_P0027592	zf-C2H2	PF00096.26	2.2e-15	2	3
MGP_LPJ_P0027592	zf-C2H2	PF00096.26	2.2e-15	3	3
MGP_LPJ_P0027590	zf-met	PF12874.7	3.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0027588	-	1853	-	-	- (aa)	-	-
MGP_LPJ_T0027589	-	844	-	-	- (aa)	-	-
MGP_LPJ_T0027593	-	3118	-	MGP_LPJ_P0027593	641 (aa)	-	-
MGP_LPJ_T0027592	-	2930	-	MGP_LPJ_P0027592	537 (aa)	-	-
MGP_LPJ_T0027591	-	1904	-	MGP_LPJ_P0027591	102 (aa)	-	-
MGP_LPJ_T0027590	-	3927	-	MGP_LPJ_P0027590	687 (aa)	-	-
MGP_LPJ_T0027597	-	495	-	MGP_LPJ_P0027597	70 (aa)	-	-
MGP_LPJ_T0027596	-	652	-	-	- (aa)	-	-
MGP_LPJ_T0027595	-	456	-	-	- (aa)	-	-
MGP_LPJ_T0027587	-	798	NR_045109	-	- (aa)	-	-
MGP_LPJ_T0027594	-	1249	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0017864	Patz1	82	37.895	MGP_LPJ_G0023906	Zbtb14	93	38.889