EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0018115 (Gene tree)
Gene ID: -
Gene Symbol: Irgm1
Alias: Ifggd3|Ifi1|Iigp3|Iipg3|Irgm|LRG-47
Full Name: immunity-related GTPase family M member 1
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 9750 bases
Position: chr11:48140802-48150551
Accession: 107567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0028648	MMR_HSR1	PF01926.23	5.6e-05	1	1
MGP_LPJ_P0028647	MMR_HSR1	PF01926.23	9.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0028648	-	1213	-	MGP_LPJ_P0028648	288 (aa)	-	-
MGP_LPJ_T0028646	-	3832	-	-	- (aa)	-	-
MGP_LPJ_T0028647	-	2259	-	MGP_LPJ_P0028647	409 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0018115's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0018115's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0018115	Irgm1	86	38.554	MGP_LPJ_G0018117	Gm12185	76	37.209
MGP_LPJ_G0018115	Irgm1	83	41.146	MGP_LPJ_G0018116	Gm5431	67	41.146
MGP_LPJ_G0018115	Irgm1	89	56.031	MGP_LPJ_G0018256	Igtp	90	49.740
MGP_LPJ_G0018115	Irgm1	89	31.937	MGP_LPJ_G0018124	Ifi47	91	31.937
MGP_LPJ_G0018115	Irgm1	82	39.095	MGP_LPJ_G0018122	Tgtp1	72	36.667
MGP_LPJ_G0018115	Irgm1	82	39.095	MGP_LPJ_G0018123	Tgtp2	72	36.667
MGP_LPJ_G0018115	Irgm1	79	36.864	MGP_LPJ_G0024376	Gm4951	77	33.013
MGP_LPJ_G0018115	Irgm1	65	39.175	MGP_LPJ_G0024377	F830016B08Rik	72	34.000
MGP_LPJ_G0018115	Irgm1	76	35.169	MGP_LPJ_G0031731	Irgc1	71	30.183
MGP_LPJ_G0018115	Irgm1	83	62.185	MGP_LPJ_G0018257	Irgm2	92	50.135