EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_LPJ_G0018116 (Gene tree)
Gene ID: -
Gene Symbol: Gm5431
Alias: EG432555
Full Name: predicted gene 5431
Gene Type: protein_coding
Species: Mus_musculus_lpj
Status: putative
Strand: Minus strand
Length: 14205 bases
Position: chr11:48166861-48181065
Accession: 3645205
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_LPJ_P0028649	MMR_HSR1	PF01926.23	6.2e-20	1	2
MGP_LPJ_P0028649	MMR_HSR1	PF01926.23	6.2e-20	2	2
MGP_LPJ_P0028650	MMR_HSR1	PF01926.23	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_LPJ_T0028649	-	2803	-	MGP_LPJ_P0028649	778 (aa)	-	A6PWD6
MGP_LPJ_T0028650	-	1537	-	MGP_LPJ_P0028650	488 (aa)	-	-

Gene Model

Click here to download MGP_LPJ_G0018116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_LPJ_G0018116's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_LPJ_G0018116	Gm5431	83	42.512	MGP_LPJ_G0018124	Ifi47	95	43.564
MGP_LPJ_G0018116	Gm5431	87	62.884	MGP_LPJ_G0018123	Tgtp2	99	62.884
MGP_LPJ_G0018116	Gm5431	87	62.884	MGP_LPJ_G0018122	Tgtp1	99	62.884
MGP_LPJ_G0018116	Gm5431	77	90.884	MGP_LPJ_G0018117	Gm12185	90	90.884
MGP_LPJ_G0018116	Gm5431	66	38.308	MGP_LPJ_G0018257	Irgm2	76	38.308
MGP_LPJ_G0018116	Gm5431	66	36.181	MGP_LPJ_G0018256	Igtp	71	36.318
MGP_LPJ_G0018116	Gm5431	83	49.136	MGP_LPJ_G0024377	F830016B08Rik	97	49.136
MGP_LPJ_G0018116	Gm5431	82	47.436	MGP_LPJ_G0024376	Gm4951	98	47.436
MGP_LPJ_G0018116	Gm5431	67	41.146	MGP_LPJ_G0018115	Irgm1	83	41.146
MGP_LPJ_G0018116	Gm5431	67	40.196	MGP_LPJ_G0031731	Irgc1	68	40.196